Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.07■□□□□ 0.48
PRPHP41219 PHKG1P2-201ENST00000457537 863 ntBASIC18.07■□□□□ 0.48
PRPHP41219 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PRPHP41219 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.07■□□□□ 0.48
PRPHP41219 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.07■□□□□ 0.48
PRPHP41219 AC015911.4-201ENST00000588022 1070 ntBASIC18.07■□□□□ 0.48
PRPHP41219 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
PRPHP41219 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.07■□□□□ 0.48
PRPHP41219 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.07■□□□□ 0.48
PRPHP41219 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
PRPHP41219 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRPHP41219 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.07■□□□□ 0.48
PRPHP41219 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.07■□□□□ 0.48
PRPHP41219 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.07■□□□□ 0.48
PRPHP41219 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRPHP41219 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.07■□□□□ 0.48
PRPHP41219 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRPHP41219 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.07■□□□□ 0.48
PRPHP41219 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.07■□□□□ 0.48
PRPHP41219 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRPHP41219 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRPHP41219 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.07■□□□□ 0.48
PRPHP41219 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PRPHP41219 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.06■□□□□ 0.48
PRPHP41219 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.06■□□□□ 0.48
PRPHP41219 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.06■□□□□ 0.48
PRPHP41219 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PRPHP41219 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.06■□□□□ 0.48
PRPHP41219 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PRPHP41219 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PRPHP41219 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRPHP41219 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PRPHP41219 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PRPHP41219 FO393414.2-201ENST00000405153 598 ntBASIC18.06■□□□□ 0.48
PRPHP41219 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.06■□□□□ 0.48
PRPHP41219 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.06■□□□□ 0.48
PRPHP41219 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.06■□□□□ 0.48
PRPHP41219 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.06■□□□□ 0.48
PRPHP41219 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.06■□□□□ 0.48
PRPHP41219 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PRPHP41219 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRPHP41219 AC139530.3-201ENST00000620344 690 ntBASIC18.06■□□□□ 0.48
PRPHP41219 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.06■□□□□ 0.48
PRPHP41219 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.06■□□□□ 0.48
PRPHP41219 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PRPHP41219 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.06■□□□□ 0.48
PRPHP41219 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PRPHP41219 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRPHP41219 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRPHP41219 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PRPHP41219 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.06■□□□□ 0.48
PRPHP41219 AC018892.3-201ENST00000623986 2499 ntBASIC18.06■□□□□ 0.48
PRPHP41219 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
PRPHP41219 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.06■□□□□ 0.48
PRPHP41219 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PRPHP41219 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRPHP41219 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PRPHP41219 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRPHP41219 KRT8P12-202ENST00000472924 1397 ntBASIC18.05■□□□□ 0.48
PRPHP41219 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.05■□□□□ 0.48
PRPHP41219 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PRPHP41219 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
PRPHP41219 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.05■□□□□ 0.48
PRPHP41219 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PRPHP41219 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRPHP41219 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRPHP41219 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PRPHP41219 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.05■□□□□ 0.48
PRPHP41219 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PRPHP41219 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRPHP41219 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRPHP41219 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PRPHP41219 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.05■□□□□ 0.48
PRPHP41219 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.05■□□□□ 0.48
PRPHP41219 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.05■□□□□ 0.48
PRPHP41219 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.05■□□□□ 0.48
PRPHP41219 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PRPHP41219 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.05■□□□□ 0.48
PRPHP41219 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PRPHP41219 MIR4313-201ENST00000580760 101 ntBASIC18.05■□□□□ 0.48
PRPHP41219 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.05■□□□□ 0.48
PRPHP41219 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.05■□□□□ 0.48
PRPHP41219 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRPHP41219 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.05■□□□□ 0.48
PRPHP41219 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRPHP41219 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRPHP41219 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.05■□□□□ 0.48
PRPHP41219 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PRPHP41219 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
PRPHP41219 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.05■□□□□ 0.48
PRPHP41219 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRPHP41219 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PRPHP41219 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PRPHP41219 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRPHP41219 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRPHP41219 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.04■□□□□ 0.48
PRPHP41219 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PRPHP41219 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PRPHP41219 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRPHP41219 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms