Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SNCAP37840 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCAP37840 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SNCAP37840 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
SNCAP37840 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCAP37840 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SNCAP37840 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
SNCAP37840 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.26□□□□□ -0.29
SNCAP37840 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCAP37840 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SNCAP37840 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCAP37840 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCAP37840 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.26□□□□□ -0.29
SNCAP37840 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.26□□□□□ -0.29
SNCAP37840 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.26□□□□□ -0.29
SNCAP37840 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.26□□□□□ -0.29
SNCAP37840 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.26□□□□□ -0.29
SNCAP37840 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SNCAP37840 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.26□□□□□ -0.29
SNCAP37840 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCAP37840 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.26□□□□□ -0.29
SNCAP37840 POU5F1P6-201ENST00000466990 990 ntBASIC13.26□□□□□ -0.29
SNCAP37840 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.26□□□□□ -0.29
SNCAP37840 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.26□□□□□ -0.29
SNCAP37840 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCAP37840 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.26□□□□□ -0.29
SNCAP37840 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SNCAP37840 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.26□□□□□ -0.29
SNCAP37840 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.26□□□□□ -0.29
SNCAP37840 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCAP37840 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.26□□□□□ -0.29
SNCAP37840 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
SNCAP37840 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCAP37840 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
SNCAP37840 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SNCAP37840 AC020658.6-201ENST00000623564 1870 ntBASIC13.26□□□□□ -0.29
SNCAP37840 AL512652.2-201ENST00000625156 1716 ntBASIC13.26□□□□□ -0.29
SNCAP37840 LINC01144-201ENST00000626198 1710 ntBASIC13.26□□□□□ -0.29
SNCAP37840 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.26□□□□□ -0.29
SNCAP37840 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.26□□□□□ -0.29
SNCAP37840 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNCAP37840 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SNCAP37840 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.26□□□□□ -0.29
SNCAP37840 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SNCAP37840 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SNCAP37840 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.25□□□□□ -0.29
SNCAP37840 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.25□□□□□ -0.29
SNCAP37840 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.25□□□□□ -0.29
SNCAP37840 PCGF3-213ENST00000620529 1899 ntBASIC13.25□□□□□ -0.29
SNCAP37840 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.25□□□□□ -0.29
SNCAP37840 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SNCAP37840 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
SNCAP37840 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.25□□□□□ -0.29
SNCAP37840 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SNCAP37840 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.25□□□□□ -0.29
SNCAP37840 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.25□□□□□ -0.29
SNCAP37840 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SNCAP37840 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.25□□□□□ -0.29
SNCAP37840 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 PTCHD3P3-201ENST00000403073 906 ntBASIC13.25□□□□□ -0.29
SNCAP37840 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.25□□□□□ -0.29
SNCAP37840 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.25□□□□□ -0.29
SNCAP37840 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SNCAP37840 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.25□□□□□ -0.29
SNCAP37840 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.25□□□□□ -0.29
SNCAP37840 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.25□□□□□ -0.29
SNCAP37840 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.25□□□□□ -0.29
SNCAP37840 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.25□□□□□ -0.29
SNCAP37840 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.25□□□□□ -0.29
SNCAP37840 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.25□□□□□ -0.29
SNCAP37840 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.25□□□□□ -0.29
SNCAP37840 MIR4492-201ENST00000581627 80 ntBASIC13.25□□□□□ -0.29
SNCAP37840 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.25□□□□□ -0.29
SNCAP37840 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 AC008608.2-201ENST00000606089 416 ntBASIC13.25□□□□□ -0.29
SNCAP37840 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.25□□□□□ -0.29
SNCAP37840 AC004706.3-202ENST00000621574 984 ntBASIC13.25□□□□□ -0.29
SNCAP37840 AL355877.3-201ENST00000622820 899 ntBASIC13.25□□□□□ -0.29
SNCAP37840 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.25□□□□□ -0.29
SNCAP37840 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms