Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTNNA1P35221 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTNNA1P35221 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CTNNA1P35221 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.97■□□□□ 0.31
CTNNA1P35221 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNNA1P35221 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNNA1P35221 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
CTNNA1P35221 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTNNA1P35221 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNNA1P35221 AC025580.3-201ENST00000617932 1424 ntBASIC16.96■□□□□ 0.31
CTNNA1P35221 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.96■□□□□ 0.31
CTNNA1P35221 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNNA1P35221 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CTNNA1P35221 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNNA1P35221 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNNA1P35221 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNNA1P35221 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.96■□□□□ 0.31
CTNNA1P35221 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNNA1P35221 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.96■□□□□ 0.31
CTNNA1P35221 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.96■□□□□ 0.31
CTNNA1P35221 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTNNA1P35221 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNNA1P35221 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CTNNA1P35221 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.96■□□□□ 0.31
CTNNA1P35221 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNNA1P35221 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNNA1P35221 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.96■□□□□ 0.31
CTNNA1P35221 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNNA1P35221 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTNNA1P35221 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNNA1P35221 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.96■□□□□ 0.31
CTNNA1P35221 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.96■□□□□ 0.31
CTNNA1P35221 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.96■□□□□ 0.31
CTNNA1P35221 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.96■□□□□ 0.31
CTNNA1P35221 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.96■□□□□ 0.31
CTNNA1P35221 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.96■□□□□ 0.31
CTNNA1P35221 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CTNNA1P35221 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNNA1P35221 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.96■□□□□ 0.31
CTNNA1P35221 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.96■□□□□ 0.31
CTNNA1P35221 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.96■□□□□ 0.31
CTNNA1P35221 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNNA1P35221 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CTNNA1P35221 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.96■□□□□ 0.31
CTNNA1P35221 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.96■□□□□ 0.31
CTNNA1P35221 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CTNNA1P35221 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNNA1P35221 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CTNNA1P35221 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.96■□□□□ 0.3
CTNNA1P35221 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.96■□□□□ 0.3
CTNNA1P35221 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
CTNNA1P35221 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CTNNA1P35221 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CTNNA1P35221 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CTNNA1P35221 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.3
CTNNA1P35221 FAM45BP-202ENST00000592932 1624 ntBASIC16.96■□□□□ 0.3
CTNNA1P35221 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.96■□□□□ 0.3
CTNNA1P35221 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.95■□□□□ 0.3
CTNNA1P35221 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTNNA1P35221 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTNNA1P35221 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTNNA1P35221 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTNNA1P35221 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTNNA1P35221 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTNNA1P35221 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTNNA1P35221 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CTNNA1P35221 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTNNA1P35221 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTNNA1P35221 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CTNNA1P35221 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTNNA1P35221 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTNNA1P35221 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.95■□□□□ 0.3
CTNNA1P35221 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CTNNA1P35221 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.95■□□□□ 0.3
CTNNA1P35221 AP001282.1-201ENST00000531301 1499 ntBASIC16.95■□□□□ 0.3
CTNNA1P35221 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTNNA1P35221 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.95■□□□□ 0.3
CTNNA1P35221 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTNNA1P35221 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CTNNA1P35221 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTNNA1P35221 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.95■□□□□ 0.3
CTNNA1P35221 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTNNA1P35221 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CTNNA1P35221 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.95■□□□□ 0.3
CTNNA1P35221 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
CTNNA1P35221 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CTNNA1P35221 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.95■□□□□ 0.3
CTNNA1P35221 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CTNNA1P35221 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.95■□□□□ 0.3
CTNNA1P35221 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.95■□□□□ 0.3
CTNNA1P35221 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.95■□□□□ 0.3
CTNNA1P35221 AC004877.2-201ENST00000623941 599 ntBASIC16.95■□□□□ 0.3
CTNNA1P35221 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.95■□□□□ 0.3
CTNNA1P35221 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTNNA1P35221 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTNNA1P35221 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTNNA1P35221 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.95■□□□□ 0.3
CTNNA1P35221 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTNNA1P35221 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.95■□□□□ 0.3
CTNNA1P35221 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms