Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCN1P31025 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.89□□□□□ -0.03
LCN1P31025 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
LCN1P31025 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
LCN1P31025 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.89□□□□□ -0.03
LCN1P31025 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.89□□□□□ -0.03
LCN1P31025 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCN1P31025 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCN1P31025 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCN1P31025 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.89□□□□□ -0.03
LCN1P31025 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCN1P31025 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCN1P31025 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.89□□□□□ -0.03
LCN1P31025 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCN1P31025 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
LCN1P31025 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LCN1P31025 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.89□□□□□ -0.03
LCN1P31025 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.89□□□□□ -0.03
LCN1P31025 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LCN1P31025 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.89□□□□□ -0.03
LCN1P31025 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCN1P31025 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
LCN1P31025 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCN1P31025 AL603832.2-201ENST00000566195 2125 ntBASIC14.89□□□□□ -0.03
LCN1P31025 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCN1P31025 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LCN1P31025 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.89□□□□□ -0.03
LCN1P31025 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.88□□□□□ -0.03
LCN1P31025 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.88□□□□□ -0.03
LCN1P31025 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.88□□□□□ -0.03
LCN1P31025 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
LCN1P31025 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LCN1P31025 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LCN1P31025 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 RPS8P6-201ENST00000426177 609 ntBASIC14.88□□□□□ -0.03
LCN1P31025 AC004967.1-201ENST00000453589 447 ntBASIC14.88□□□□□ -0.03
LCN1P31025 AL139010.1-201ENST00000454878 894 ntBASIC14.88□□□□□ -0.03
LCN1P31025 AC023141.5-201ENST00000458585 616 ntBASIC14.88□□□□□ -0.03
LCN1P31025 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.88□□□□□ -0.03
LCN1P31025 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LCN1P31025 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LCN1P31025 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.88□□□□□ -0.03
LCN1P31025 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.88□□□□□ -0.03
LCN1P31025 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.88□□□□□ -0.03
LCN1P31025 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.88□□□□□ -0.03
LCN1P31025 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
LCN1P31025 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.88□□□□□ -0.03
LCN1P31025 AL662844.4-201ENST00000606367 2838 ntBASIC14.88□□□□□ -0.03
LCN1P31025 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LCN1P31025 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LCN1P31025 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LCN1P31025 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LCN1P31025 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
LCN1P31025 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LCN1P31025 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LCN1P31025 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LCN1P31025 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.87□□□□□ -0.03
LCN1P31025 CDC14C-201ENST00000428251 1719 ntBASIC14.87□□□□□ -0.03
LCN1P31025 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LCN1P31025 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LCN1P31025 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LCN1P31025 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LCN1P31025 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LCN1P31025 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.87□□□□□ -0.03
LCN1P31025 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LCN1P31025 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LCN1P31025 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
LCN1P31025 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LCN1P31025 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LCN1P31025 AC004987.2-201ENST00000395959 1148 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms