Protein–RNA interactions for Protein: P30511

HLA-F, HLA class I histocompatibility antigen, alpha chain F, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-FP30511 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-FP30511 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-FP30511 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HLA-FP30511 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
HLA-FP30511 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-FP30511 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-FP30511 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HLA-FP30511 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-FP30511 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-FP30511 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-FP30511 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.18■□□□□ 0.18
HLA-FP30511 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-FP30511 AL607033.1-201ENST00000623900 1599 ntBASIC16.18■□□□□ 0.18
HLA-FP30511 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-FP30511 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
HLA-FP30511 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-FP30511 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-FP30511 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-FP30511 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-FP30511 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-FP30511 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
HLA-FP30511 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-FP30511 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.18■□□□□ 0.18
HLA-FP30511 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-FP30511 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-FP30511 RN7SL399P-201ENST00000471648 279 ntBASIC16.18■□□□□ 0.18
HLA-FP30511 SLED1-202ENST00000512051 380 ntBASIC16.18■□□□□ 0.18
HLA-FP30511 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-FP30511 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-FP30511 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-FP30511 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
HLA-FP30511 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-FP30511 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
HLA-FP30511 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-FP30511 CDC14C-201ENST00000428251 1719 ntBASIC16.18■□□□□ 0.18
HLA-FP30511 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HLA-FP30511 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-FP30511 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-FP30511 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-FP30511 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
HLA-FP30511 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-FP30511 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.18■□□□□ 0.18
HLA-FP30511 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-FP30511 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HLA-FP30511 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-FP30511 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-FP30511 CLK3P2-201ENST00000427566 1453 ntBASIC16.17■□□□□ 0.18
HLA-FP30511 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HLA-FP30511 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-FP30511 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-FP30511 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-FP30511 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
HLA-FP30511 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-FP30511 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-FP30511 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-FP30511 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-FP30511 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-FP30511 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-FP30511 TOMM22P5-201ENST00000416399 439 ntBASIC16.17■□□□□ 0.18
HLA-FP30511 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HLA-FP30511 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.17■□□□□ 0.18
HLA-FP30511 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-FP30511 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-FP30511 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.17■□□□□ 0.18
HLA-FP30511 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.17■□□□□ 0.18
HLA-FP30511 AC132938.2-201ENST00000579188 680 ntBASIC16.17■□□□□ 0.18
HLA-FP30511 TMEM261P1-201ENST00000604899 340 ntBASIC16.17■□□□□ 0.18
HLA-FP30511 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.17■□□□□ 0.18
HLA-FP30511 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.17■□□□□ 0.18
HLA-FP30511 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.17■□□□□ 0.18
HLA-FP30511 AL591163.1-201ENST00000641757 987 ntBASIC16.17■□□□□ 0.18
HLA-FP30511 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-FP30511 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.17■□□□□ 0.18
HLA-FP30511 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HLA-FP30511 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-FP30511 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-FP30511 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-FP30511 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-FP30511 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-FP30511 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-FP30511 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-FP30511 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-FP30511 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-FP30511 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HLA-FP30511 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-FP30511 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-FP30511 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-FP30511 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-FP30511 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-FP30511 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HLA-FP30511 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-FP30511 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
HLA-FP30511 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
HLA-FP30511 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-FP30511 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
HLA-FP30511 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-FP30511 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-FP30511 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-FP30511 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-FP30511 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms