Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CD40LGP29965 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CD40LGP29965 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD40LGP29965 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.27□□□□□ -0.12
CD40LGP29965 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CD40LGP29965 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.27□□□□□ -0.12
CD40LGP29965 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD40LGP29965 KRT8P44-201ENST00000441609 1350 ntBASIC14.27□□□□□ -0.12
CD40LGP29965 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD40LGP29965 AC003669.1-201ENST00000334569 611 ntBASIC14.27□□□□□ -0.13
CD40LGP29965 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CD40LGP29965 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.27□□□□□ -0.13
CD40LGP29965 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD40LGP29965 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD40LGP29965 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CD40LGP29965 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.27□□□□□ -0.13
CD40LGP29965 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CD40LGP29965 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.27□□□□□ -0.13
CD40LGP29965 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.27□□□□□ -0.13
CD40LGP29965 AD001527.2-201ENST00000622994 785 ntBASIC14.27□□□□□ -0.13
CD40LGP29965 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.27□□□□□ -0.13
CD40LGP29965 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CD40LGP29965 AL928921.2-201ENST00000641325 2442 ntBASIC14.27□□□□□ -0.13
CD40LGP29965 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CD40LGP29965 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.27□□□□□ -0.13
CD40LGP29965 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CD40LGP29965 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD40LGP29965 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.27□□□□□ -0.13
CD40LGP29965 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD40LGP29965 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CD40LGP29965 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD40LGP29965 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CD40LGP29965 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.27□□□□□ -0.13
CD40LGP29965 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD40LGP29965 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.27□□□□□ -0.13
CD40LGP29965 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CD40LGP29965 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.26□□□□□ -0.13
CD40LGP29965 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 SLC22A20-204ENST00000530038 1673 ntBASIC14.26□□□□□ -0.13
CD40LGP29965 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CD40LGP29965 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.26□□□□□ -0.13
CD40LGP29965 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.26□□□□□ -0.13
CD40LGP29965 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CD40LGP29965 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CD40LGP29965 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.26□□□□□ -0.13
CD40LGP29965 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.26□□□□□ -0.13
CD40LGP29965 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.26□□□□□ -0.13
CD40LGP29965 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 MIR1224-201ENST00000408193 85 ntBASIC14.26□□□□□ -0.13
CD40LGP29965 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.26□□□□□ -0.13
CD40LGP29965 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.26□□□□□ -0.13
CD40LGP29965 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CD40LGP29965 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 NTF6B-201ENST00000591913 560 ntBASIC14.26□□□□□ -0.13
CD40LGP29965 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.26□□□□□ -0.13
CD40LGP29965 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CD40LGP29965 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CD40LGP29965 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.26□□□□□ -0.13
CD40LGP29965 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 CICP8-201ENST00000455800 2813 ntBASIC14.26□□□□□ -0.13
CD40LGP29965 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CD40LGP29965 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CD40LGP29965 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CD40LGP29965 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.26□□□□□ -0.13
CD40LGP29965 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CD40LGP29965 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40LGP29965 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
CD40LGP29965 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.25□□□□□ -0.13
CD40LGP29965 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms