Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
XPAP23025 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
XPAP23025 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
XPAP23025 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
XPAP23025 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.17■□□□□ 0.18
XPAP23025 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
XPAP23025 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
XPAP23025 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
XPAP23025 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.17■□□□□ 0.18
XPAP23025 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
XPAP23025 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
XPAP23025 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
XPAP23025 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
XPAP23025 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
XPAP23025 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
XPAP23025 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
XPAP23025 AL136982.4-201ENST00000437689 1740 ntBASIC16.16■□□□□ 0.18
XPAP23025 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
XPAP23025 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.16■□□□□ 0.18
XPAP23025 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.16■□□□□ 0.18
XPAP23025 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
XPAP23025 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.16■□□□□ 0.18
XPAP23025 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.16■□□□□ 0.18
XPAP23025 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
XPAP23025 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
XPAP23025 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
XPAP23025 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
XPAP23025 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
XPAP23025 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
XPAP23025 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.16■□□□□ 0.18
XPAP23025 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.16■□□□□ 0.18
XPAP23025 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
XPAP23025 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
XPAP23025 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.16■□□□□ 0.18
XPAP23025 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
XPAP23025 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
XPAP23025 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
XPAP23025 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
XPAP23025 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
XPAP23025 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.16■□□□□ 0.18
XPAP23025 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.16■□□□□ 0.18
XPAP23025 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
XPAP23025 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
XPAP23025 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
XPAP23025 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.16■□□□□ 0.18
XPAP23025 AC004987.2-201ENST00000395959 1148 ntBASIC16.16■□□□□ 0.18
XPAP23025 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.16■□□□□ 0.18
XPAP23025 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.16■□□□□ 0.18
XPAP23025 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.16■□□□□ 0.18
XPAP23025 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.16■□□□□ 0.18
XPAP23025 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.16■□□□□ 0.18
XPAP23025 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.16■□□□□ 0.18
XPAP23025 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.16■□□□□ 0.18
XPAP23025 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
XPAP23025 AL691432.1-201ENST00000596308 1422 ntBASIC16.16■□□□□ 0.18
XPAP23025 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
XPAP23025 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.16■□□□□ 0.18
XPAP23025 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
XPAP23025 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
XPAP23025 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
XPAP23025 AC022144.1-201ENST00000602255 1580 ntBASIC16.16■□□□□ 0.18
XPAP23025 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.16■□□□□ 0.18
XPAP23025 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
XPAP23025 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
XPAP23025 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
XPAP23025 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
XPAP23025 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
XPAP23025 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
XPAP23025 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.15■□□□□ 0.18
XPAP23025 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
XPAP23025 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
XPAP23025 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
XPAP23025 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
XPAP23025 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
XPAP23025 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
XPAP23025 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
XPAP23025 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
XPAP23025 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
XPAP23025 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
XPAP23025 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
XPAP23025 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
XPAP23025 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
XPAP23025 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
XPAP23025 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
XPAP23025 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
XPAP23025 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
XPAP23025 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.15■□□□□ 0.18
XPAP23025 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
XPAP23025 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
XPAP23025 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
XPAP23025 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
XPAP23025 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.15■□□□□ 0.18
XPAP23025 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.15■□□□□ 0.18
XPAP23025 AC004890.2-204ENST00000481968 304 ntBASIC16.15■□□□□ 0.18
XPAP23025 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.15■□□□□ 0.18
XPAP23025 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.15■□□□□ 0.18
XPAP23025 MIR3197-201ENST00000582241 73 ntBASIC16.15■□□□□ 0.18
XPAP23025 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.15■□□□□ 0.18
XPAP23025 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
XPAP23025 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms