Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH3P22223 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CDH3P22223 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH3P22223 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH3P22223 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH3P22223 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH3P22223 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH3P22223 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH3P22223 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH3P22223 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH3P22223 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH3P22223 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH3P22223 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH3P22223 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH3P22223 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH3P22223 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.78■□□□□ 0.12
CDH3P22223 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.78■□□□□ 0.12
CDH3P22223 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH3P22223 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CDH3P22223 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH3P22223 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CDH3P22223 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.78■□□□□ 0.12
CDH3P22223 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.78■□□□□ 0.12
CDH3P22223 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH3P22223 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH3P22223 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH3P22223 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CDH3P22223 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CDH3P22223 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
CDH3P22223 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.78■□□□□ 0.12
CDH3P22223 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.78■□□□□ 0.12
CDH3P22223 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.78■□□□□ 0.12
CDH3P22223 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.78■□□□□ 0.12
CDH3P22223 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.78■□□□□ 0.12
CDH3P22223 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CDH3P22223 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.78■□□□□ 0.12
CDH3P22223 DUX4L27-201ENST00000554796 1261 ntBASIC15.78■□□□□ 0.12
CDH3P22223 AC051619.7-201ENST00000568314 623 ntBASIC15.78■□□□□ 0.12
CDH3P22223 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.78■□□□□ 0.12
CDH3P22223 MIR4453-201ENST00000584019 89 ntBASIC15.78■□□□□ 0.12
CDH3P22223 AC018529.1-201ENST00000613063 361 ntBASIC15.78■□□□□ 0.12
CDH3P22223 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH3P22223 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH3P22223 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.78■□□□□ 0.12
CDH3P22223 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH3P22223 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH3P22223 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH3P22223 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
CDH3P22223 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CDH3P22223 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.78■□□□□ 0.12
CDH3P22223 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH3P22223 FOXO1B-201ENST00000504678 1527 ntBASIC15.78■□□□□ 0.12
CDH3P22223 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.78■□□□□ 0.12
CDH3P22223 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH3P22223 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH3P22223 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.77■□□□□ 0.12
CDH3P22223 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH3P22223 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.77■□□□□ 0.12
CDH3P22223 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CDH3P22223 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
CDH3P22223 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CDH3P22223 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH3P22223 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH3P22223 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH3P22223 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH3P22223 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH3P22223 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH3P22223 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH3P22223 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDH3P22223 C8orf49-201ENST00000525043 1968 ntBASIC15.77■□□□□ 0.12
CDH3P22223 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH3P22223 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH3P22223 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH3P22223 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CDH3P22223 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CDH3P22223 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDH3P22223 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDH3P22223 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CDH3P22223 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
CDH3P22223 MIR943-201ENST00000401286 94 ntBASIC15.77■□□□□ 0.12
CDH3P22223 AC093724.1-201ENST00000448659 1027 ntBASIC15.77■□□□□ 0.12
CDH3P22223 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH3P22223 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.77■□□□□ 0.12
CDH3P22223 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH3P22223 AC011467.4-201ENST00000594891 528 ntBASIC15.77■□□□□ 0.12
CDH3P22223 AC126177.1-201ENST00000547829 2218 ntBASIC15.77■□□□□ 0.12
CDH3P22223 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
CDH3P22223 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH3P22223 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH3P22223 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.77■□□□□ 0.11
CDH3P22223 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH3P22223 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH3P22223 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH3P22223 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
CDH3P22223 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.77■□□□□ 0.11
CDH3P22223 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH3P22223 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CDH3P22223 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH3P22223 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH3P22223 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms