Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 AC079602.3-201ENST00000623931 403 ntBASIC12.36□□□□□ -0.43
RAB4AP20338 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
RAB4AP20338 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB4AP20338 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
RAB4AP20338 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.36□□□□□ -0.43
RAB4AP20338 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.36□□□□□ -0.43
RAB4AP20338 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB4AP20338 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
RAB4AP20338 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB4AP20338 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB4AP20338 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB4AP20338 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB4AP20338 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB4AP20338 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.36□□□□□ -0.43
RAB4AP20338 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB4AP20338 FUT8-AS1-201ENST00000621019 1521 ntBASIC12.36□□□□□ -0.43
RAB4AP20338 CSPG4P11-201ENST00000560634 4910 ntBASIC12.36□□□□□ -0.43
RAB4AP20338 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB4AP20338 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB4AP20338 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.35□□□□□ -0.43
RAB4AP20338 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB4AP20338 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.35□□□□□ -0.43
RAB4AP20338 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
RAB4AP20338 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
RAB4AP20338 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 AL353692.3-201ENST00000407031 1396 ntBASIC12.35□□□□□ -0.43
RAB4AP20338 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB4AP20338 AC006504.5-208ENST00000588784 2401 ntBASIC12.35□□□□□ -0.43
RAB4AP20338 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.35□□□□□ -0.43
RAB4AP20338 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
RAB4AP20338 IGHGP-201ENST00000390555 1178 ntBASIC12.35□□□□□ -0.43
RAB4AP20338 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
RAB4AP20338 CD81-212ENST00000526072 1172 ntTSL 5 BASIC12.35□□□□□ -0.43
RAB4AP20338 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB4AP20338 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC12.35□□□□□ -0.43
RAB4AP20338 GPX4-207ENST00000589115 812 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB4AP20338 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
RAB4AP20338 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
RAB4AP20338 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
RAB4AP20338 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
RAB4AP20338 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB4AP20338 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB4AP20338 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB4AP20338 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB4AP20338 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
RAB4AP20338 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
RAB4AP20338 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.34□□□□□ -0.43
RAB4AP20338 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
RAB4AP20338 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB4AP20338 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms