Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
H2AFXP16104 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.65■□□□□ 0.26
H2AFXP16104 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.65■□□□□ 0.26
H2AFXP16104 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.65■□□□□ 0.26
H2AFXP16104 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.65■□□□□ 0.26
H2AFXP16104 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
H2AFXP16104 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.64■□□□□ 0.26
H2AFXP16104 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
H2AFXP16104 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
H2AFXP16104 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
H2AFXP16104 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2AFXP16104 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2AFXP16104 AC134407.2-201ENST00000625089 1978 ntBASIC16.64■□□□□ 0.25
H2AFXP16104 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2AFXP16104 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
H2AFXP16104 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.64■□□□□ 0.25
H2AFXP16104 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2AFXP16104 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.64■□□□□ 0.25
H2AFXP16104 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
H2AFXP16104 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2AFXP16104 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
H2AFXP16104 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
H2AFXP16104 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.64■□□□□ 0.25
H2AFXP16104 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.64■□□□□ 0.25
H2AFXP16104 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.64■□□□□ 0.25
H2AFXP16104 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
H2AFXP16104 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2AFXP16104 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
H2AFXP16104 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
H2AFXP16104 AP001350.2-201ENST00000625104 1094 ntBASIC16.64■□□□□ 0.25
H2AFXP16104 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.64■□□□□ 0.25
H2AFXP16104 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2AFXP16104 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.64■□□□□ 0.25
H2AFXP16104 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.64■□□□□ 0.25
H2AFXP16104 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2AFXP16104 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2AFXP16104 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2AFXP16104 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2AFXP16104 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
H2AFXP16104 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
H2AFXP16104 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2AFXP16104 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.64■□□□□ 0.25
H2AFXP16104 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.64■□□□□ 0.25
H2AFXP16104 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2AFXP16104 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.64■□□□□ 0.25
H2AFXP16104 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2AFXP16104 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
H2AFXP16104 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
H2AFXP16104 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.63■□□□□ 0.25
H2AFXP16104 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
H2AFXP16104 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
H2AFXP16104 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.63■□□□□ 0.25
H2AFXP16104 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.63■□□□□ 0.25
H2AFXP16104 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
H2AFXP16104 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
H2AFXP16104 NFIC-211ENST00000641145 8399 ntBASIC16.63■□□□□ 0.25
H2AFXP16104 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
H2AFXP16104 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2AFXP16104 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2AFXP16104 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
H2AFXP16104 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2AFXP16104 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2AFXP16104 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.63■□□□□ 0.25
H2AFXP16104 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.63■□□□□ 0.25
H2AFXP16104 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.63■□□□□ 0.25
H2AFXP16104 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.63■□□□□ 0.25
H2AFXP16104 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2AFXP16104 HYMAI.1-201ENST00000620949 238 ntBASIC16.63■□□□□ 0.25
H2AFXP16104 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
H2AFXP16104 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
H2AFXP16104 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2AFXP16104 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.63■□□□□ 0.25
H2AFXP16104 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2AFXP16104 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
H2AFXP16104 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2AFXP16104 INTS4P1-203ENST00000641008 3683 ntBASIC16.63■□□□□ 0.25
H2AFXP16104 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2AFXP16104 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.63■□□□□ 0.25
H2AFXP16104 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.63■□□□□ 0.25
H2AFXP16104 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2AFXP16104 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
H2AFXP16104 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.63■□□□□ 0.25
H2AFXP16104 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2AFXP16104 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2AFXP16104 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2AFXP16104 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
H2AFXP16104 AC105206.1-202ENST00000314927 2368 ntBASIC16.63■□□□□ 0.25
H2AFXP16104 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2AFXP16104 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
H2AFXP16104 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2AFXP16104 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC16.63■□□□□ 0.25
H2AFXP16104 PPT1-213ENST00000641319 2388 ntBASIC16.63■□□□□ 0.25
H2AFXP16104 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2AFXP16104 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2AFXP16104 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2AFXP16104 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2AFXP16104 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2AFXP16104 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
H2AFXP16104 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2AFXP16104 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms