Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC130P13994 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC130P13994 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC130P13994 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CCDC130P13994 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC130P13994 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC130P13994 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC130P13994 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC130P13994 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.95■□□□□ 0.3
CCDC130P13994 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC130P13994 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC130P13994 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC130P13994 AC044860.1-202ENST00000559481 777 ntBASIC16.95■□□□□ 0.3
CCDC130P13994 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC130P13994 AC008738.7-201ENST00000609744 511 ntBASIC16.95■□□□□ 0.3
CCDC130P13994 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC130P13994 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC130P13994 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC130P13994 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC130P13994 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CCDC130P13994 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC130P13994 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC130P13994 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC130P13994 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC130P13994 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC130P13994 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC130P13994 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC130P13994 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC130P13994 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC130P13994 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CCDC130P13994 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC130P13994 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC130P13994 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC130P13994 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCDC130P13994 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC130P13994 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC130P13994 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC130P13994 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC130P13994 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC130P13994 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC130P13994 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CCDC130P13994 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC130P13994 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC130P13994 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCDC130P13994 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC130P13994 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC130P13994 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC130P13994 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC130P13994 MIR661-201ENST00000384842 89 ntBASIC16.94■□□□□ 0.3
CCDC130P13994 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC130P13994 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC130P13994 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC130P13994 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC130P13994 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC130P13994 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC130P13994 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC130P13994 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC130P13994 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CCDC130P13994 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC130P13994 MIR6069-201ENST00000620069 79 ntBASIC16.94■□□□□ 0.3
CCDC130P13994 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC130P13994 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.94■□□□□ 0.3
CCDC130P13994 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
CCDC130P13994 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
CCDC130P13994 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCDC130P13994 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC130P13994 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC130P13994 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC130P13994 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC130P13994 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC130P13994 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC130P13994 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
CCDC130P13994 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC130P13994 AC022188.1-201ENST00000620960 1664 ntBASIC16.94■□□□□ 0.3
CCDC130P13994 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CCDC130P13994 AL513477.1-201ENST00000602865 2407 ntBASIC16.94■□□□□ 0.3
CCDC130P13994 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC130P13994 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CCDC130P13994 AC112504.1-201ENST00000623415 1841 ntBASIC16.93■□□□□ 0.3
CCDC130P13994 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC130P13994 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC130P13994 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CCDC130P13994 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC130P13994 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC130P13994 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC130P13994 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC130P13994 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC130P13994 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC130P13994 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC130P13994 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC130P13994 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC130P13994 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC130P13994 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC130P13994 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC130P13994 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC130P13994 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.93■□□□□ 0.3
CCDC130P13994 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC130P13994 FAM8A3P-201ENST00000427218 844 ntBASIC16.93■□□□□ 0.3
CCDC130P13994 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.93■□□□□ 0.3
CCDC130P13994 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms