Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SFTPBP07988 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SFTPBP07988 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.02□□□□□ -0.17
SFTPBP07988 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.02□□□□□ -0.17
SFTPBP07988 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SFTPBP07988 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.02□□□□□ -0.17
SFTPBP07988 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SFTPBP07988 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
SFTPBP07988 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.02□□□□□ -0.17
SFTPBP07988 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SFTPBP07988 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SFTPBP07988 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SFTPBP07988 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SFTPBP07988 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.01□□□□□ -0.17
SFTPBP07988 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SFTPBP07988 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SFTPBP07988 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SFTPBP07988 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SFTPBP07988 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SFTPBP07988 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SFTPBP07988 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SFTPBP07988 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SFTPBP07988 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SFTPBP07988 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SFTPBP07988 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SFTPBP07988 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SFTPBP07988 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.01□□□□□ -0.17
SFTPBP07988 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SFTPBP07988 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SFTPBP07988 AC004832.2-201ENST00000426397 482 ntBASIC14.01□□□□□ -0.17
SFTPBP07988 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.01□□□□□ -0.17
SFTPBP07988 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SFTPBP07988 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.01□□□□□ -0.17
SFTPBP07988 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.01□□□□□ -0.17
SFTPBP07988 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.01□□□□□ -0.17
SFTPBP07988 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.01□□□□□ -0.17
SFTPBP07988 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.01□□□□□ -0.17
SFTPBP07988 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
SFTPBP07988 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SFTPBP07988 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SFTPBP07988 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SFTPBP07988 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SFTPBP07988 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SFTPBP07988 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SFTPBP07988 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SFTPBP07988 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.01□□□□□ -0.17
SFTPBP07988 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.01□□□□□ -0.17
SFTPBP07988 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.01□□□□□ -0.17
SFTPBP07988 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SFTPBP07988 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SFTPBP07988 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SFTPBP07988 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SFTPBP07988 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SFTPBP07988 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SFTPBP07988 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14□□□□□ -0.17
SFTPBP07988 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14□□□□□ -0.17
SFTPBP07988 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SFTPBP07988 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SFTPBP07988 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SFTPBP07988 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SFTPBP07988 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14□□□□□ -0.17
SFTPBP07988 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SFTPBP07988 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14□□□□□ -0.17
SFTPBP07988 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SFTPBP07988 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SFTPBP07988 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SFTPBP07988 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SFTPBP07988 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
SFTPBP07988 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SFTPBP07988 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SFTPBP07988 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SFTPBP07988 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SFTPBP07988 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
SFTPBP07988 RNU1-129P-201ENST00000384064 167 ntBASIC14□□□□□ -0.17
SFTPBP07988 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14□□□□□ -0.17
SFTPBP07988 UPF3AP3-201ENST00000420996 769 ntBASIC14□□□□□ -0.17
SFTPBP07988 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14□□□□□ -0.17
SFTPBP07988 GPX1P2-201ENST00000429271 606 ntBASIC14□□□□□ -0.17
SFTPBP07988 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14□□□□□ -0.17
SFTPBP07988 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14□□□□□ -0.17
SFTPBP07988 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14□□□□□ -0.17
SFTPBP07988 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14□□□□□ -0.17
SFTPBP07988 U1.21-201ENST00000580816 167 ntBASIC14□□□□□ -0.17
SFTPBP07988 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14□□□□□ -0.17
SFTPBP07988 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14□□□□□ -0.17
SFTPBP07988 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14□□□□□ -0.17
SFTPBP07988 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SFTPBP07988 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14□□□□□ -0.17
SFTPBP07988 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SFTPBP07988 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14□□□□□ -0.17
SFTPBP07988 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14□□□□□ -0.17
SFTPBP07988 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SFTPBP07988 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14□□□□□ -0.17
SFTPBP07988 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14□□□□□ -0.17
SFTPBP07988 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SFTPBP07988 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SFTPBP07988 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14□□□□□ -0.17
SFTPBP07988 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14□□□□□ -0.17
SFTPBP07988 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14□□□□□ -0.17
SFTPBP07988 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms