Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TPM2P07951 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TPM2P07951 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.33■□□□□ 0.53
TPM2P07951 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.33■□□□□ 0.53
TPM2P07951 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.33■□□□□ 0.53
TPM2P07951 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.53
TPM2P07951 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC18.33■□□□□ 0.53
TPM2P07951 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM2P07951 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TPM2P07951 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM2P07951 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM2P07951 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM2P07951 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.33■□□□□ 0.52
TPM2P07951 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.33■□□□□ 0.52
TPM2P07951 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.33■□□□□ 0.52
TPM2P07951 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.33■□□□□ 0.52
TPM2P07951 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.33■□□□□ 0.52
TPM2P07951 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM2P07951 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC18.33■□□□□ 0.52
TPM2P07951 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM2P07951 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM2P07951 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM2P07951 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM2P07951 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM2P07951 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
TPM2P07951 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM2P07951 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM2P07951 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM2P07951 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.33■□□□□ 0.52
TPM2P07951 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM2P07951 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.32■□□□□ 0.52
TPM2P07951 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM2P07951 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPM2P07951 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM2P07951 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
TPM2P07951 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM2P07951 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.32■□□□□ 0.52
TPM2P07951 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM2P07951 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC18.32■□□□□ 0.52
TPM2P07951 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM2P07951 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM2P07951 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.32■□□□□ 0.52
TPM2P07951 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TPM2P07951 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TPM2P07951 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.32■□□□□ 0.52
TPM2P07951 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM2P07951 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.32■□□□□ 0.52
TPM2P07951 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM2P07951 PTCHD3P3-201ENST00000403073 906 ntBASIC18.32■□□□□ 0.52
TPM2P07951 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.32■□□□□ 0.52
TPM2P07951 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPM2P07951 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.32■□□□□ 0.52
TPM2P07951 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM2P07951 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.32■□□□□ 0.52
TPM2P07951 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.32■□□□□ 0.52
TPM2P07951 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.32■□□□□ 0.52
TPM2P07951 MIR4492-201ENST00000581627 80 ntBASIC18.32■□□□□ 0.52
TPM2P07951 AC006557.2-201ENST00000592985 1240 ntBASIC18.32■□□□□ 0.52
TPM2P07951 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPM2P07951 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.32■□□□□ 0.52
TPM2P07951 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC18.32■□□□□ 0.52
TPM2P07951 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM2P07951 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM2P07951 PRAL-201ENST00000624952 3286 ntBASIC18.32■□□□□ 0.52
TPM2P07951 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM2P07951 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM2P07951 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC18.32■□□□□ 0.52
TPM2P07951 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM2P07951 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
TPM2P07951 AL512652.2-201ENST00000625156 1716 ntBASIC18.32■□□□□ 0.52
TPM2P07951 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM2P07951 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.31■□□□□ 0.52
TPM2P07951 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.31■□□□□ 0.52
TPM2P07951 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.31■□□□□ 0.52
TPM2P07951 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.31■□□□□ 0.52
TPM2P07951 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC18.31■□□□□ 0.52
TPM2P07951 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
TPM2P07951 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 AL031731.1-201ENST00000642131 2094 ntBASIC18.31■□□□□ 0.52
TPM2P07951 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.31■□□□□ 0.52
TPM2P07951 AC136621.1-201ENST00000624017 2304 ntBASIC18.31■□□□□ 0.52
TPM2P07951 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
TPM2P07951 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.31■□□□□ 0.52
TPM2P07951 KRT18P31-201ENST00000506277 1292 ntBASIC18.31■□□□□ 0.52
TPM2P07951 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.31■□□□□ 0.52
TPM2P07951 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM2P07951 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms