Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
P04436 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P04436 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
P04436 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
P04436 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
P04436 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P04436 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
P04436 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
P04436 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.61□□□□□ -0.07
P04436 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P04436 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P04436 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.61□□□□□ -0.07
P04436 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P04436 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.61□□□□□ -0.07
P04436 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.61□□□□□ -0.07
P04436 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.61□□□□□ -0.07
P04436 SPTLC1P1-201ENST00000447199 261 ntBASIC14.61□□□□□ -0.07
P04436 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.61□□□□□ -0.07
P04436 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
P04436 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.61□□□□□ -0.07
P04436 DOC2GP-202ENST00000514950 1163 ntBASIC14.61□□□□□ -0.07
P04436 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.61□□□□□ -0.07
P04436 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.61□□□□□ -0.07
P04436 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
P04436 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.61□□□□□ -0.07
P04436 AC104794.3-201ENST00000566840 1248 ntBASIC14.61□□□□□ -0.07
P04436 AC074044.1-201ENST00000609673 707 ntBASIC14.61□□□□□ -0.07
P04436 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
P04436 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
P04436 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.61□□□□□ -0.07
P04436 AL662844.4-201ENST00000606367 2838 ntBASIC14.61□□□□□ -0.07
P04436 AC134407.2-201ENST00000625089 1978 ntBASIC14.61□□□□□ -0.07
P04436 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
P04436 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
P04436 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
P04436 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.61□□□□□ -0.07
P04436 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.61□□□□□ -0.07
P04436 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
P04436 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
P04436 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.61□□□□□ -0.07
P04436 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P04436 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.61□□□□□ -0.07
P04436 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.61□□□□□ -0.07
P04436 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
P04436 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
P04436 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
P04436 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
P04436 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
P04436 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
P04436 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
P04436 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
P04436 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
P04436 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.6□□□□□ -0.07
P04436 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.6□□□□□ -0.07
P04436 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
P04436 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
P04436 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.6□□□□□ -0.07
P04436 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
P04436 AC063926.3-201ENST00000624734 5658 ntBASIC14.6□□□□□ -0.07
P04436 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.6□□□□□ -0.07
P04436 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
P04436 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
P04436 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
P04436 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.6□□□□□ -0.07
P04436 HIST3H2BA-201ENST00000436555 524 ntBASIC14.6□□□□□ -0.07
P04436 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.6□□□□□ -0.07
P04436 EEF1DP4-201ENST00000446006 880 ntBASIC14.6□□□□□ -0.07
P04436 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.6□□□□□ -0.07
P04436 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.6□□□□□ -0.07
P04436 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.6□□□□□ -0.07
P04436 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.6□□□□□ -0.07
P04436 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
P04436 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
P04436 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.6□□□□□ -0.07
P04436 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.6□□□□□ -0.07
P04436 AC004461.2-201ENST00000629517 803 ntBASIC14.6□□□□□ -0.07
P04436 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
P04436 AC007541.1-201ENST00000570282 1469 ntBASIC14.6□□□□□ -0.07
P04436 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
P04436 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.6□□□□□ -0.07
P04436 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
P04436 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
P04436 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.6□□□□□ -0.07
P04436 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
P04436 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
P04436 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
P04436 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
P04436 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
P04436 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
P04436 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
P04436 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
P04436 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
P04436 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
P04436 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
P04436 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
P04436 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
P04436 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
P04436 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
P04436 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
P04436 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms