Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND1P03886 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND1P03886 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MT-ND1P03886 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND1P03886 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
MT-ND1P03886 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.19■□□□□ 0.02
MT-ND1P03886 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.19■□□□□ 0.02
MT-ND1P03886 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
MT-ND1P03886 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MT-ND1P03886 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
MT-ND1P03886 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND1P03886 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND1P03886 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND1P03886 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND1P03886 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.18■□□□□ 0.02
MT-ND1P03886 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND1P03886 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.18■□□□□ 0.02
MT-ND1P03886 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND1P03886 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND1P03886 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
MT-ND1P03886 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.18■□□□□ 0.02
MT-ND1P03886 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND1P03886 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND1P03886 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
MT-ND1P03886 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
MT-ND1P03886 AC073621.1-201ENST00000392730 636 ntBASIC15.18■□□□□ 0.02
MT-ND1P03886 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
MT-ND1P03886 RPS2P1-201ENST00000434010 821 ntBASIC15.18■□□□□ 0.02
MT-ND1P03886 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
MT-ND1P03886 AC136632.2-201ENST00000512891 861 ntBASIC15.18■□□□□ 0.02
MT-ND1P03886 AL160237.2-201ENST00000556165 472 ntBASIC15.18■□□□□ 0.02
MT-ND1P03886 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.18■□□□□ 0.02
MT-ND1P03886 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.18■□□□□ 0.02
MT-ND1P03886 AC005412.3-201ENST00000580309 715 ntBASIC15.18■□□□□ 0.02
MT-ND1P03886 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
MT-ND1P03886 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.18■□□□□ 0.02
MT-ND1P03886 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND1P03886 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.18■□□□□ 0.02
MT-ND1P03886 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.18■□□□□ 0.02
MT-ND1P03886 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND1P03886 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND1P03886 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND1P03886 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND1P03886 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND1P03886 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.18■□□□□ 0.02
MT-ND1P03886 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND1P03886 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
MT-ND1P03886 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.18■□□□□ 0.02
MT-ND1P03886 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND1P03886 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.18■□□□□ 0.02
MT-ND1P03886 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-ND1P03886 AC129492.6-201ENST00000611383 1305 ntBASIC15.17■□□□□ 0.02
MT-ND1P03886 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 AC090616.6-203ENST00000579186 1945 ntBASIC15.17■□□□□ 0.02
MT-ND1P03886 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.17■□□□□ 0.02
MT-ND1P03886 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
MT-ND1P03886 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MT-ND1P03886 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
MT-ND1P03886 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
MT-ND1P03886 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
MT-ND1P03886 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
MT-ND1P03886 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.17■□□□□ 0.02
MT-ND1P03886 U82695.1-201ENST00000635752 1889 ntBASIC15.17■□□□□ 0.02
MT-ND1P03886 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MT-ND1P03886 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.17■□□□□ 0.02
MT-ND1P03886 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
MT-ND1P03886 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MT-ND1P03886 HCG4-201ENST00000418983 998 ntBASIC15.17■□□□□ 0.02
MT-ND1P03886 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.17■□□□□ 0.02
MT-ND1P03886 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.17■□□□□ 0.02
MT-ND1P03886 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.17■□□□□ 0.02
MT-ND1P03886 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
MT-ND1P03886 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
MT-ND1P03886 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-ND1P03886 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms