Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNA1P02708 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRNA1P02708 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRNA1P02708 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CHRNA1P02708 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.28■□□□□ 0.36
CHRNA1P02708 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.28■□□□□ 0.36
CHRNA1P02708 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CHRNA1P02708 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNA1P02708 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.27■□□□□ 0.36
CHRNA1P02708 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNA1P02708 AL121723.1-201ENST00000445194 1519 ntBASIC17.27■□□□□ 0.36
CHRNA1P02708 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNA1P02708 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.27■□□□□ 0.36
CHRNA1P02708 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.27■□□□□ 0.36
CHRNA1P02708 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CHRNA1P02708 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.27■□□□□ 0.36
CHRNA1P02708 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNA1P02708 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNA1P02708 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CHRNA1P02708 CSF2RBP1-201ENST00000447905 391 ntBASIC17.27■□□□□ 0.36
CHRNA1P02708 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CHRNA1P02708 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CHRNA1P02708 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNA1P02708 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.27■□□□□ 0.36
CHRNA1P02708 AC005252.2-201ENST00000624630 1141 ntBASIC17.27■□□□□ 0.36
CHRNA1P02708 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CHRNA1P02708 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHRNA1P02708 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CHRNA1P02708 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.27■□□□□ 0.35
CHRNA1P02708 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHRNA1P02708 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.27■□□□□ 0.35
CHRNA1P02708 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.27■□□□□ 0.35
CHRNA1P02708 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.26■□□□□ 0.35
CHRNA1P02708 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.26■□□□□ 0.35
CHRNA1P02708 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA1P02708 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.26■□□□□ 0.35
CHRNA1P02708 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA1P02708 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.26■□□□□ 0.35
CHRNA1P02708 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA1P02708 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.26■□□□□ 0.35
CHRNA1P02708 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA1P02708 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CHRNA1P02708 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.26■□□□□ 0.35
CHRNA1P02708 BAATP1-201ENST00000412284 1225 ntBASIC17.26■□□□□ 0.35
CHRNA1P02708 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.26■□□□□ 0.35
CHRNA1P02708 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.26■□□□□ 0.35
CHRNA1P02708 RPL7P3-201ENST00000441388 714 ntBASIC17.26■□□□□ 0.35
CHRNA1P02708 AC093433.1-201ENST00000458048 571 ntBASIC17.26■□□□□ 0.35
CHRNA1P02708 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA1P02708 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CHRNA1P02708 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA1P02708 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA1P02708 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.26■□□□□ 0.35
CHRNA1P02708 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.26■□□□□ 0.35
CHRNA1P02708 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA1P02708 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA1P02708 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.26■□□□□ 0.35
CHRNA1P02708 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CHRNA1P02708 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA1P02708 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA1P02708 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CHRNA1P02708 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CHRNA1P02708 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.26■□□□□ 0.35
CHRNA1P02708 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA1P02708 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA1P02708 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA1P02708 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.26■□□□□ 0.35
CHRNA1P02708 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRNA1P02708 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
CHRNA1P02708 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CHRNA1P02708 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRNA1P02708 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CHRNA1P02708 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CHRNA1P02708 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CHRNA1P02708 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
CHRNA1P02708 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.25■□□□□ 0.35
CHRNA1P02708 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 MIR1908-201ENST00000410394 80 ntBASIC17.25■□□□□ 0.35
CHRNA1P02708 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.25■□□□□ 0.35
CHRNA1P02708 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA1P02708 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRNA1P02708 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRNA1P02708 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.25■□□□□ 0.35
CHRNA1P02708 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRNA1P02708 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms