Protein–RNA interactions for Protein: P01911

HLA-DRB1, HLA class II histocompatibility antigen, DRB1-15 beta chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1P01911 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 CNN2P11-201ENST00000429351 262 ntBASIC12.93□□□□□ -0.34
HLA-DRB1P01911 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 AC023141.5-201ENST00000458585 616 ntBASIC12.93□□□□□ -0.34
HLA-DRB1P01911 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 SLC25A39P2-201ENST00000537614 270 ntBASIC12.93□□□□□ -0.34
HLA-DRB1P01911 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 SNHG9-202ENST00000564014 471 ntBASIC12.93□□□□□ -0.34
HLA-DRB1P01911 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 MIR4321-201ENST00000592276 80 ntBASIC12.93□□□□□ -0.34
HLA-DRB1P01911 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 AC009093.7-201ENST00000623853 1223 ntBASIC12.93□□□□□ -0.34
HLA-DRB1P01911 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DRB1P01911 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 MIR648-201ENST00000385046 94 ntBASIC12.92□□□□□ -0.34
HLA-DRB1P01911 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 AC104640.1-201ENST00000562617 2109 ntBASIC12.92□□□□□ -0.34
HLA-DRB1P01911 AL596087.1-201ENST00000400979 1969 ntBASIC12.92□□□□□ -0.34
HLA-DRB1P01911 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB1P01911 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms