Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
IFNA1P01562 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 BAALC-202ENST00000306391 243 ntTSL 5 BASIC12.74□□□□□ -0.37
IFNA1P01562 BAALC-204ENST00000330955 222 ntTSL 5 BASIC12.74□□□□□ -0.37
IFNA1P01562 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC12.74□□□□□ -0.37
IFNA1P01562 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 DANCR-204ENST00000444958 709 ntTSL 3 BASIC12.74□□□□□ -0.37
IFNA1P01562 AL359075.1-203ENST00000462729 1002 ntBASIC12.74□□□□□ -0.37
IFNA1P01562 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC12.74□□□□□ -0.37
IFNA1P01562 AC090192.1-201ENST00000517740 490 ntBASIC12.74□□□□□ -0.37
IFNA1P01562 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
IFNA1P01562 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
IFNA1P01562 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC12.74□□□□□ -0.37
IFNA1P01562 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC12.74□□□□□ -0.37
IFNA1P01562 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC12.74□□□□□ -0.37
IFNA1P01562 AC140113.3-201ENST00000605663 199 ntBASIC12.74□□□□□ -0.37
IFNA1P01562 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.74□□□□□ -0.37
IFNA1P01562 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.74□□□□□ -0.37
IFNA1P01562 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
IFNA1P01562 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
IFNA1P01562 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 AC090616.6-203ENST00000579186 1945 ntBASIC12.74□□□□□ -0.37
IFNA1P01562 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
IFNA1P01562 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
IFNA1P01562 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 AC005912.2-201ENST00000619492 2400 ntBASIC12.73□□□□□ -0.37
IFNA1P01562 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.73□□□□□ -0.37
IFNA1P01562 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
IFNA1P01562 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.73□□□□□ -0.37
IFNA1P01562 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
IFNA1P01562 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC12.73□□□□□ -0.37
IFNA1P01562 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 AL020989.1-201ENST00000422979 469 ntBASIC12.73□□□□□ -0.37
IFNA1P01562 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC12.73□□□□□ -0.37
IFNA1P01562 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.73□□□□□ -0.37
IFNA1P01562 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
IFNA1P01562 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 MIR4492-201ENST00000581627 80 ntBASIC12.73□□□□□ -0.37
IFNA1P01562 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC12.73□□□□□ -0.37
IFNA1P01562 Z99916.2-201ENST00000604037 246 ntBASIC12.73□□□□□ -0.37
IFNA1P01562 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC12.73□□□□□ -0.37
IFNA1P01562 FAM87A-204ENST00000613235 858 ntBASIC12.73□□□□□ -0.37
IFNA1P01562 GLDC-219ENST00000640208 420 ntTSL 2 BASIC12.73□□□□□ -0.37
IFNA1P01562 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.73□□□□□ -0.37
IFNA1P01562 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
IFNA1P01562 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.73□□□□□ -0.37
IFNA1P01562 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.73□□□□□ -0.37
IFNA1P01562 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.73□□□□□ -0.37
IFNA1P01562 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
IFNA1P01562 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IFNA1P01562 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
IFNA1P01562 C18orf15-201ENST00000623680 2534 ntBASIC12.72□□□□□ -0.37
IFNA1P01562 FGD5P1-202ENST00000614866 2498 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms