Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LDLRP01130 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.58■□□□□ 0.08
LDLRP01130 PPT1-215ENST00000641471 2368 ntBASIC15.58■□□□□ 0.08
LDLRP01130 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.58■□□□□ 0.08
LDLRP01130 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LDLRP01130 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LDLRP01130 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LDLRP01130 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LDLRP01130 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LDLRP01130 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LDLRP01130 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LDLRP01130 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.58■□□□□ 0.08
LDLRP01130 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.57■□□□□ 0.08
LDLRP01130 AL512652.2-201ENST00000625156 1716 ntBASIC15.57■□□□□ 0.08
LDLRP01130 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LDLRP01130 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.57■□□□□ 0.08
LDLRP01130 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 REXO1L8P-201ENST00000604378 1897 ntBASIC15.57■□□□□ 0.08
LDLRP01130 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.57■□□□□ 0.08
LDLRP01130 MIR600HG-201ENST00000449175 5984 ntBASIC15.57■□□□□ 0.08
LDLRP01130 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 AL031731.1-201ENST00000642131 2094 ntBASIC15.57■□□□□ 0.08
LDLRP01130 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
LDLRP01130 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.57■□□□□ 0.08
LDLRP01130 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.57■□□□□ 0.08
LDLRP01130 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.57■□□□□ 0.08
LDLRP01130 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.57■□□□□ 0.08
LDLRP01130 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.57■□□□□ 0.08
LDLRP01130 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 SIGLEC30P-201ENST00000455569 941 ntBASIC15.57■□□□□ 0.08
LDLRP01130 POU5F1P6-201ENST00000466990 990 ntBASIC15.57■□□□□ 0.08
LDLRP01130 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.57■□□□□ 0.08
LDLRP01130 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.57■□□□□ 0.08
LDLRP01130 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.57■□□□□ 0.08
LDLRP01130 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.57■□□□□ 0.08
LDLRP01130 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LDLRP01130 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.57■□□□□ 0.08
LDLRP01130 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.57■□□□□ 0.08
LDLRP01130 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 AC063926.2-201ENST00000623766 1308 ntBASIC15.57■□□□□ 0.08
LDLRP01130 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LDLRP01130 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.57■□□□□ 0.08
LDLRP01130 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.57■□□□□ 0.08
LDLRP01130 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.57■□□□□ 0.08
LDLRP01130 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.57■□□□□ 0.08
LDLRP01130 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LDLRP01130 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.57■□□□□ 0.08
LDLRP01130 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.57■□□□□ 0.08
LDLRP01130 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LDLRP01130 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.57■□□□□ 0.08
LDLRP01130 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LDLRP01130 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
LDLRP01130 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LDLRP01130 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LDLRP01130 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LDLRP01130 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.56■□□□□ 0.08
LDLRP01130 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LDLRP01130 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
LDLRP01130 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LDLRP01130 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.56■□□□□ 0.08
LDLRP01130 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LDLRP01130 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
LDLRP01130 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.56■□□□□ 0.08
LDLRP01130 MRPL20P1-201ENST00000400819 433 ntBASIC15.56■□□□□ 0.08
LDLRP01130 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.56■□□□□ 0.08
LDLRP01130 AC004461.1-201ENST00000412461 403 ntBASIC15.56■□□□□ 0.08
LDLRP01130 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.56■□□□□ 0.08
LDLRP01130 AC074386.1-202ENST00000463561 864 ntBASIC15.56■□□□□ 0.08
LDLRP01130 AC069262.1-201ENST00000539058 672 ntBASIC15.56■□□□□ 0.08
LDLRP01130 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.56■□□□□ 0.08
LDLRP01130 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.56■□□□□ 0.08
LDLRP01130 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.56■□□□□ 0.08
LDLRP01130 AC091812.2-201ENST00000619081 385 ntBASIC15.56■□□□□ 0.08
LDLRP01130 Z92544.3-201ENST00000624747 417 ntBASIC15.56■□□□□ 0.08
LDLRP01130 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms