Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.45■□□□□ 0.22
MT-CO1P00395 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.45■□□□□ 0.22
MT-CO1P00395 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.45■□□□□ 0.22
MT-CO1P00395 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.45■□□□□ 0.22
MT-CO1P00395 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
MT-CO1P00395 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.45■□□□□ 0.22
MT-CO1P00395 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MT-CO1P00395 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-CO1P00395 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.45■□□□□ 0.22
MT-CO1P00395 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-CO1P00395 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.45■□□□□ 0.22
MT-CO1P00395 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MT-CO1P00395 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-CO1P00395 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-CO1P00395 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MT-CO1P00395 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.45■□□□□ 0.22
MT-CO1P00395 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-CO1P00395 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.45■□□□□ 0.22
MT-CO1P00395 AC007950.2-201ENST00000615045 2347 ntBASIC16.45■□□□□ 0.22
MT-CO1P00395 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
MT-CO1P00395 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.45■□□□□ 0.22
MT-CO1P00395 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-CO1P00395 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-CO1P00395 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-CO1P00395 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MT-CO1P00395 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-CO1P00395 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.44■□□□□ 0.22
MT-CO1P00395 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
MT-CO1P00395 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.44■□□□□ 0.22
MT-CO1P00395 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
MT-CO1P00395 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
MT-CO1P00395 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-CO1P00395 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.44■□□□□ 0.22
MT-CO1P00395 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
MT-CO1P00395 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
MT-CO1P00395 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MT-CO1P00395 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.44■□□□□ 0.22
MT-CO1P00395 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MT-CO1P00395 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.44■□□□□ 0.22
MT-CO1P00395 AL080243.2-201ENST00000418783 582 ntBASIC16.44■□□□□ 0.22
MT-CO1P00395 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-CO1P00395 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.44■□□□□ 0.22
MT-CO1P00395 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
MT-CO1P00395 AC092364.2-202ENST00000597012 1073 ntBASIC16.44■□□□□ 0.22
MT-CO1P00395 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.44■□□□□ 0.22
MT-CO1P00395 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.44■□□□□ 0.22
MT-CO1P00395 AJ011932.1-201ENST00000621707 465 ntBASIC16.44■□□□□ 0.22
MT-CO1P00395 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.44■□□□□ 0.22
MT-CO1P00395 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-CO1P00395 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
MT-CO1P00395 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-CO1P00395 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MT-CO1P00395 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-CO1P00395 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
MT-CO1P00395 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-CO1P00395 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.44■□□□□ 0.22
MT-CO1P00395 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-CO1P00395 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-CO1P00395 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
MT-CO1P00395 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-CO1P00395 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
MT-CO1P00395 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.43■□□□□ 0.22
MT-CO1P00395 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
MT-CO1P00395 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-CO1P00395 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-CO1P00395 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-CO1P00395 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MT-CO1P00395 AC006449.6-201ENST00000612330 2296 ntBASIC16.43■□□□□ 0.22
MT-CO1P00395 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-CO1P00395 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-CO1P00395 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-CO1P00395 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
MT-CO1P00395 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.43■□□□□ 0.22
MT-CO1P00395 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.43■□□□□ 0.22
MT-CO1P00395 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.43■□□□□ 0.22
MT-CO1P00395 MIR661-201ENST00000384842 89 ntBASIC16.43■□□□□ 0.22
MT-CO1P00395 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.43■□□□□ 0.22
MT-CO1P00395 MRPS18AP1-201ENST00000414458 589 ntBASIC16.43■□□□□ 0.22
MT-CO1P00395 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.43■□□□□ 0.22
MT-CO1P00395 AL139010.1-201ENST00000454878 894 ntBASIC16.43■□□□□ 0.22
MT-CO1P00395 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.43■□□□□ 0.22
MT-CO1P00395 AL512638.1-201ENST00000457493 794 ntBASIC16.43■□□□□ 0.22
MT-CO1P00395 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.43■□□□□ 0.22
MT-CO1P00395 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.43■□□□□ 0.22
MT-CO1P00395 AC026979.3-201ENST00000607315 403 ntBASIC16.43■□□□□ 0.22
MT-CO1P00395 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MT-CO1P00395 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
MT-CO1P00395 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MT-CO1P00395 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-CO1P00395 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-CO1P00395 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-CO1P00395 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
MT-CO1P00395 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
MT-CO1P00395 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.43■□□□□ 0.22
MT-CO1P00395 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.43■□□□□ 0.22
MT-CO1P00395 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-CO1P00395 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-CO1P00395 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.43■□□□□ 0.22
MT-CO1P00395 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-CO1P00395 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms