Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GGPS1O95749 RN7SL837P-201ENST00000463010 287 ntBASIC17.91■□□□□ 0.46
GGPS1O95749 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GGPS1O95749 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.91■□□□□ 0.46
GGPS1O95749 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.91■□□□□ 0.46
GGPS1O95749 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
GGPS1O95749 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
GGPS1O95749 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
GGPS1O95749 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.91■□□□□ 0.46
GGPS1O95749 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.91■□□□□ 0.46
GGPS1O95749 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.91■□□□□ 0.46
GGPS1O95749 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.91■□□□□ 0.46
GGPS1O95749 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.91■□□□□ 0.46
GGPS1O95749 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
GGPS1O95749 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
GGPS1O95749 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.91■□□□□ 0.46
GGPS1O95749 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GGPS1O95749 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GGPS1O95749 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.91■□□□□ 0.46
GGPS1O95749 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GGPS1O95749 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GGPS1O95749 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
GGPS1O95749 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
GGPS1O95749 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.91■□□□□ 0.46
GGPS1O95749 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GGPS1O95749 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
GGPS1O95749 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GGPS1O95749 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.9■□□□□ 0.46
GGPS1O95749 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
GGPS1O95749 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GGPS1O95749 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GGPS1O95749 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.9■□□□□ 0.46
GGPS1O95749 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
GGPS1O95749 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.9■□□□□ 0.46
GGPS1O95749 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
GGPS1O95749 CLK3P2-201ENST00000427566 1453 ntBASIC17.9■□□□□ 0.46
GGPS1O95749 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.9■□□□□ 0.46
GGPS1O95749 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.9■□□□□ 0.46
GGPS1O95749 AC006449.6-201ENST00000612330 2296 ntBASIC17.9■□□□□ 0.46
GGPS1O95749 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.9■□□□□ 0.46
GGPS1O95749 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GGPS1O95749 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
GGPS1O95749 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.9■□□□□ 0.46
GGPS1O95749 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.9■□□□□ 0.46
GGPS1O95749 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.9■□□□□ 0.46
GGPS1O95749 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GGPS1O95749 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.9■□□□□ 0.46
GGPS1O95749 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.9■□□□□ 0.46
GGPS1O95749 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.9■□□□□ 0.46
GGPS1O95749 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.9■□□□□ 0.46
GGPS1O95749 AL008721.1-201ENST00000609964 604 ntBASIC17.9■□□□□ 0.46
GGPS1O95749 WFDC1-204ENST00000613603 549 ntBASIC17.9■□□□□ 0.46
GGPS1O95749 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GGPS1O95749 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GGPS1O95749 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GGPS1O95749 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GGPS1O95749 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.9■□□□□ 0.46
GGPS1O95749 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
GGPS1O95749 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GGPS1O95749 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GGPS1O95749 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GGPS1O95749 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GGPS1O95749 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.9■□□□□ 0.46
GGPS1O95749 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
GGPS1O95749 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
GGPS1O95749 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
GGPS1O95749 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.46
GGPS1O95749 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
GGPS1O95749 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.89■□□□□ 0.45
GGPS1O95749 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GGPS1O95749 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.89■□□□□ 0.45
GGPS1O95749 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GGPS1O95749 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
GGPS1O95749 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GGPS1O95749 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GGPS1O95749 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.89■□□□□ 0.45
GGPS1O95749 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.89■□□□□ 0.45
GGPS1O95749 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.89■□□□□ 0.45
GGPS1O95749 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.89■□□□□ 0.45
GGPS1O95749 TMEM261P1-201ENST00000604899 340 ntBASIC17.89■□□□□ 0.45
GGPS1O95749 AL391069.4-201ENST00000609583 481 ntBASIC17.89■□□□□ 0.45
GGPS1O95749 AL158212.4-201ENST00000624062 1286 ntBASIC17.89■□□□□ 0.45
GGPS1O95749 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.89■□□□□ 0.45
GGPS1O95749 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GGPS1O95749 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
GGPS1O95749 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.89■□□□□ 0.45
GGPS1O95749 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
GGPS1O95749 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GGPS1O95749 CDC14C-201ENST00000428251 1719 ntBASIC17.89■□□□□ 0.45
GGPS1O95749 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.89■□□□□ 0.45
GGPS1O95749 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GGPS1O95749 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
GGPS1O95749 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GGPS1O95749 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GGPS1O95749 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
GGPS1O95749 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GGPS1O95749 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GGPS1O95749 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GGPS1O95749 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GGPS1O95749 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms