Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 PAUPAR-201ENST00000630360 2965 ntBASIC13.48□□□□□ -0.25
ABCA1O95477 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.48□□□□□ -0.25
ABCA1O95477 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ABCA1O95477 PDIA3P1-201ENST00000471856 1510 ntBASIC13.48□□□□□ -0.25
ABCA1O95477 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.47□□□□□ -0.25
ABCA1O95477 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
ABCA1O95477 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCA1O95477 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ABCA1O95477 AL645728.1-201ENST00000366221 2101 ntBASIC13.47□□□□□ -0.25
ABCA1O95477 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCA1O95477 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCA1O95477 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCA1O95477 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
ABCA1O95477 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ABCA1O95477 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.47□□□□□ -0.25
ABCA1O95477 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.47□□□□□ -0.25
ABCA1O95477 ELK1P1-201ENST00000485699 580 ntBASIC13.47□□□□□ -0.25
ABCA1O95477 SPDYE18-201ENST00000510091 1050 ntBASIC13.47□□□□□ -0.25
ABCA1O95477 DOC2GP-202ENST00000514950 1163 ntBASIC13.47□□□□□ -0.25
ABCA1O95477 RNA5SP410-201ENST00000516285 106 ntBASIC13.47□□□□□ -0.25
ABCA1O95477 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ABCA1O95477 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.47□□□□□ -0.25
ABCA1O95477 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.47□□□□□ -0.25
ABCA1O95477 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ABCA1O95477 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCA1O95477 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ABCA1O95477 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCA1O95477 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCA1O95477 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ABCA1O95477 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ABCA1O95477 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ABCA1O95477 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCA1O95477 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ABCA1O95477 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ABCA1O95477 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCA1O95477 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
ABCA1O95477 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCA1O95477 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ABCA1O95477 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCA1O95477 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.47□□□□□ -0.25
ABCA1O95477 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.47□□□□□ -0.25
ABCA1O95477 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ABCA1O95477 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
ABCA1O95477 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCA1O95477 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.47□□□□□ -0.25
ABCA1O95477 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ABCA1O95477 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
ABCA1O95477 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
ABCA1O95477 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.47□□□□□ -0.25
ABCA1O95477 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCA1O95477 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ABCA1O95477 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCA1O95477 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCA1O95477 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ABCA1O95477 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCA1O95477 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCA1O95477 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCA1O95477 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ABCA1O95477 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.46□□□□□ -0.25
ABCA1O95477 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
ABCA1O95477 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCA1O95477 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ABCA1O95477 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCA1O95477 AL603756.1-201ENST00000606511 2163 ntBASIC13.46□□□□□ -0.25
ABCA1O95477 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.46□□□□□ -0.25
ABCA1O95477 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.46□□□□□ -0.25
ABCA1O95477 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCA1O95477 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCA1O95477 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ABCA1O95477 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC13.46□□□□□ -0.25
ABCA1O95477 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCA1O95477 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.46□□□□□ -0.25
ABCA1O95477 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.46□□□□□ -0.25
ABCA1O95477 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.46□□□□□ -0.25
ABCA1O95477 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.46□□□□□ -0.25
ABCA1O95477 MIR4525-201ENST00000580000 75 ntBASIC13.46□□□□□ -0.25
ABCA1O95477 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCA1O95477 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.46□□□□□ -0.25
ABCA1O95477 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.46□□□□□ -0.25
ABCA1O95477 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
ABCA1O95477 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.46□□□□□ -0.25
ABCA1O95477 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCA1O95477 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCA1O95477 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCA1O95477 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ABCA1O95477 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCA1O95477 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.46□□□□□ -0.25
ABCA1O95477 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCA1O95477 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.46□□□□□ -0.25
ABCA1O95477 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
ABCA1O95477 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCA1O95477 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
ABCA1O95477 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ABCA1O95477 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
ABCA1O95477 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
ABCA1O95477 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ABCA1O95477 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
ABCA1O95477 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
ABCA1O95477 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms