Protein–RNA interactions for Protein: O95361

TRIM16, Tripartite motif-containing protein 16, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16O95361 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM16O95361 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM16O95361 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM16O95361 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM16O95361 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRIM16O95361 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM16O95361 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRIM16O95361 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
TRIM16O95361 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM16O95361 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM16O95361 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM16O95361 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.29■□□□□ 0.2
TRIM16O95361 KRT18P34-201ENST00000488218 1270 ntBASIC16.29■□□□□ 0.2
TRIM16O95361 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM16O95361 AP000842.3-202ENST00000569238 1080 ntBASIC16.29■□□□□ 0.2
TRIM16O95361 MIR4453-201ENST00000584019 89 ntBASIC16.29■□□□□ 0.2
TRIM16O95361 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM16O95361 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.29■□□□□ 0.2
TRIM16O95361 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM16O95361 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM16O95361 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM16O95361 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRIM16O95361 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM16O95361 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM16O95361 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRIM16O95361 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM16O95361 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM16O95361 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRIM16O95361 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM16O95361 AC126755.1-201ENST00000525846 6405 ntBASIC16.28■□□□□ 0.2
TRIM16O95361 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM16O95361 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM16O95361 AC005622.1-201ENST00000636801 1703 ntBASIC16.28■□□□□ 0.2
TRIM16O95361 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM16O95361 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM16O95361 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM16O95361 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM16O95361 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRIM16O95361 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM16O95361 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRIM16O95361 MIR346-201ENST00000362234 95 ntBASIC16.28■□□□□ 0.2
TRIM16O95361 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRIM16O95361 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM16O95361 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRIM16O95361 POU5F1P6-201ENST00000466990 990 ntBASIC16.28■□□□□ 0.2
TRIM16O95361 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.28■□□□□ 0.2
TRIM16O95361 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.28■□□□□ 0.2
TRIM16O95361 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRIM16O95361 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM16O95361 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TRIM16O95361 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.28■□□□□ 0.2
TRIM16O95361 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM16O95361 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM16O95361 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM16O95361 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM16O95361 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM16O95361 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM16O95361 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM16O95361 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.28■□□□□ 0.2
TRIM16O95361 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM16O95361 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM16O95361 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM16O95361 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRIM16O95361 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRIM16O95361 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM16O95361 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRIM16O95361 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM16O95361 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM16O95361 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM16O95361 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM16O95361 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM16O95361 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM16O95361 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRIM16O95361 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM16O95361 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM16O95361 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
TRIM16O95361 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM16O95361 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM16O95361 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM16O95361 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM16O95361 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM16O95361 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM16O95361 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM16O95361 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM16O95361 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM16O95361 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM16O95361 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM16O95361 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM16O95361 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM16O95361 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM16O95361 TSSK5P-201ENST00000423978 907 ntBASIC16.27■□□□□ 0.2
TRIM16O95361 AL353779.1-201ENST00000434793 351 ntBASIC16.27■□□□□ 0.2
TRIM16O95361 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIM16O95361 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM16O95361 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM16O95361 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
TRIM16O95361 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM16O95361 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM16O95361 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
TRIM16O95361 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms