Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.83■□□□□ 0.44
CLSTN1O94985 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.83■□□□□ 0.44
CLSTN1O94985 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLSTN1O94985 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
CLSTN1O94985 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.83■□□□□ 0.44
CLSTN1O94985 AC109635.5-201ENST00000533593 962 ntBASIC17.83■□□□□ 0.44
CLSTN1O94985 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.83■□□□□ 0.44
CLSTN1O94985 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.83■□□□□ 0.44
CLSTN1O94985 AL135744.1-201ENST00000565098 629 ntBASIC17.83■□□□□ 0.44
CLSTN1O94985 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLSTN1O94985 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CLSTN1O94985 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLSTN1O94985 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CLSTN1O94985 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.83■□□□□ 0.44
CLSTN1O94985 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.83■□□□□ 0.44
CLSTN1O94985 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.83■□□□□ 0.44
CLSTN1O94985 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.83■□□□□ 0.44
CLSTN1O94985 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLSTN1O94985 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLSTN1O94985 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.83■□□□□ 0.44
CLSTN1O94985 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLSTN1O94985 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLSTN1O94985 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLSTN1O94985 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLSTN1O94985 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLSTN1O94985 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CLSTN1O94985 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CLSTN1O94985 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLSTN1O94985 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
CLSTN1O94985 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLSTN1O94985 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLSTN1O94985 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLSTN1O94985 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLSTN1O94985 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLSTN1O94985 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLSTN1O94985 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLSTN1O94985 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CLSTN1O94985 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLSTN1O94985 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CLSTN1O94985 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.82■□□□□ 0.44
CLSTN1O94985 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.82■□□□□ 0.44
CLSTN1O94985 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLSTN1O94985 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLSTN1O94985 AL355306.1-201ENST00000415580 579 ntBASIC17.82■□□□□ 0.44
CLSTN1O94985 AC211486.1-202ENST00000416371 468 ntBASIC17.82■□□□□ 0.44
CLSTN1O94985 UPF3AP3-201ENST00000420996 769 ntBASIC17.82■□□□□ 0.44
CLSTN1O94985 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.82■□□□□ 0.44
CLSTN1O94985 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.82■□□□□ 0.44
CLSTN1O94985 AC211476.1-201ENST00000503899 468 ntBASIC17.82■□□□□ 0.44
CLSTN1O94985 IGHV3-62-201ENST00000520057 340 ntBASIC17.82■□□□□ 0.44
CLSTN1O94985 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.82■□□□□ 0.44
CLSTN1O94985 MIR3909-201ENST00000579518 119 ntBASIC17.82■□□□□ 0.44
CLSTN1O94985 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CLSTN1O94985 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.82■□□□□ 0.44
CLSTN1O94985 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.82■□□□□ 0.44
CLSTN1O94985 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.82■□□□□ 0.44
CLSTN1O94985 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLSTN1O94985 AC023511.2-201ENST00000618803 211 ntBASIC17.82■□□□□ 0.44
CLSTN1O94985 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.82■□□□□ 0.44
CLSTN1O94985 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLSTN1O94985 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.82■□□□□ 0.44
CLSTN1O94985 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC17.82■□□□□ 0.44
CLSTN1O94985 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLSTN1O94985 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.82■□□□□ 0.44
CLSTN1O94985 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLSTN1O94985 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLSTN1O94985 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLSTN1O94985 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLSTN1O94985 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLSTN1O94985 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLSTN1O94985 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.81■□□□□ 0.44
CLSTN1O94985 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.81■□□□□ 0.44
CLSTN1O94985 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLSTN1O94985 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLSTN1O94985 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLSTN1O94985 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
CLSTN1O94985 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLSTN1O94985 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLSTN1O94985 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.81■□□□□ 0.44
CLSTN1O94985 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.81■□□□□ 0.44
CLSTN1O94985 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLSTN1O94985 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.81■□□□□ 0.44
CLSTN1O94985 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CLSTN1O94985 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.81■□□□□ 0.44
CLSTN1O94985 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.81■□□□□ 0.44
CLSTN1O94985 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.81■□□□□ 0.44
CLSTN1O94985 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.81■□□□□ 0.44
CLSTN1O94985 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
CLSTN1O94985 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.81■□□□□ 0.44
CLSTN1O94985 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.81■□□□□ 0.44
CLSTN1O94985 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.81■□□□□ 0.44
CLSTN1O94985 AC099522.2-201ENST00000607001 744 ntBASIC17.81■□□□□ 0.44
CLSTN1O94985 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLSTN1O94985 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.81■□□□□ 0.44
CLSTN1O94985 AC092902.6-201ENST00000641783 218 ntBASIC17.81■□□□□ 0.44
CLSTN1O94985 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CLSTN1O94985 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLSTN1O94985 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLSTN1O94985 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.81■□□□□ 0.44
CLSTN1O94985 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms