Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC10.83□□□□□ -0.68
SNCGO76070 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 GUK1-205ENST00000366722 850 ntTSL 3 BASIC10.83□□□□□ -0.68
SNCGO76070 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
SNCGO76070 MIR638-201ENST00000385237 100 ntBASIC10.83□□□□□ -0.68
SNCGO76070 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC10.83□□□□□ -0.68
SNCGO76070 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 TSPY17P-201ENST00000450329 467 ntBASIC10.83□□□□□ -0.68
SNCGO76070 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC10.83□□□□□ -0.68
SNCGO76070 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC10.83□□□□□ -0.68
SNCGO76070 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
SNCGO76070 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
SNCGO76070 CD34-201ENST00000310833 8246 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
SNCGO76070 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC10.83□□□□□ -0.68
SNCGO76070 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC10.83□□□□□ -0.68
SNCGO76070 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 RNF125-201ENST00000217740 6020 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC10.83□□□□□ -0.68
SNCGO76070 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
SNCGO76070 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC10.83□□□□□ -0.68
SNCGO76070 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 SLC6A6P1-201ENST00000413933 1850 ntBASIC10.83□□□□□ -0.68
SNCGO76070 FAN1-201ENST00000362065 4891 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SNCGO76070 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
SNCGO76070 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
SNCGO76070 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
SNCGO76070 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC10.82□□□□□ -0.68
SNCGO76070 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
SNCGO76070 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
SNCGO76070 OS9-204ENST00000389146 2091 ntTSL 2 BASIC10.82□□□□□ -0.68
SNCGO76070 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC10.82□□□□□ -0.68
SNCGO76070 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
SNCGO76070 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC10.82□□□□□ -0.68
SNCGO76070 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 AC009154.2-201ENST00000621177 724 ntBASIC10.82□□□□□ -0.68
SNCGO76070 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC10.82□□□□□ -0.68
SNCGO76070 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC10.82□□□□□ -0.68
SNCGO76070 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC10.82□□□□□ -0.68
SNCGO76070 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
SNCGO76070 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC10.82□□□□□ -0.68
SNCGO76070 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
SNCGO76070 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
SNCGO76070 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 TBC1D3P5-201ENST00000579401 1545 ntBASIC10.82□□□□□ -0.68
SNCGO76070 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC10.82□□□□□ -0.68
SNCGO76070 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC10.82□□□□□ -0.68
SNCGO76070 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC10.82□□□□□ -0.68
SNCGO76070 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
SNCGO76070 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms