Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
HCN1O60741 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HCN1O60741 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.06■□□□□ 0
HCN1O60741 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.06■□□□□ 0
HCN1O60741 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.06■□□□□ 0
HCN1O60741 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.06■□□□□ 0
HCN1O60741 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.06■□□□□ 0
HCN1O60741 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.06■□□□□ 0
HCN1O60741 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.06■□□□□ 0
HCN1O60741 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.06■□□□□ 0
HCN1O60741 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HCN1O60741 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HCN1O60741 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.06■□□□□ 0
HCN1O60741 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HCN1O60741 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
HCN1O60741 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HCN1O60741 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HCN1O60741 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.06■□□□□ 0
HCN1O60741 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.06■□□□□ 0
HCN1O60741 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.06■□□□□ 0
HCN1O60741 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.06■□□□□ 0
HCN1O60741 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.06■□□□□ 0
HCN1O60741 AC109322.1-201ENST00000524499 1264 ntBASIC15.06■□□□□ 0
HCN1O60741 AL512356.2-201ENST00000546955 174 ntBASIC15.06■□□□□ 0
HCN1O60741 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.06■□□□□ 0
HCN1O60741 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.06■□□□□ 0
HCN1O60741 AC106028.4-201ENST00000614509 607 ntBASIC15.06■□□□□ 0
HCN1O60741 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.06■□□□□ 0
HCN1O60741 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.06■□□□□ 0
HCN1O60741 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HCN1O60741 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
HCN1O60741 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
HCN1O60741 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.06■□□□□ 0
HCN1O60741 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.06■□□□□ 0
HCN1O60741 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.06■□□□□ 0
HCN1O60741 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
HCN1O60741 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.06■□□□□ 0
HCN1O60741 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HCN1O60741 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.06■□□□□ 0
HCN1O60741 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.06■□□□□ 0
HCN1O60741 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HCN1O60741 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.06■□□□□ 0
HCN1O60741 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.06■□□□□ 0
HCN1O60741 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HCN1O60741 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.05■□□□□ 0
HCN1O60741 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
HCN1O60741 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
HCN1O60741 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
HCN1O60741 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.05■□□□□ 0
HCN1O60741 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
HCN1O60741 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HCN1O60741 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
HCN1O60741 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HCN1O60741 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
HCN1O60741 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
HCN1O60741 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HCN1O60741 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HCN1O60741 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.05■□□□□ -0
HCN1O60741 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.05■□□□□ -0
HCN1O60741 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.05■□□□□ -0
HCN1O60741 FAM86GP-201ENST00000448322 971 ntBASIC15.05■□□□□ -0
HCN1O60741 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.05■□□□□ -0
HCN1O60741 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.05■□□□□ -0
HCN1O60741 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.05■□□□□ -0
HCN1O60741 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.05■□□□□ -0
HCN1O60741 AP001059.3-201ENST00000619053 235 ntBASIC15.05■□□□□ -0
HCN1O60741 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.05■□□□□ -0
HCN1O60741 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HCN1O60741 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
HCN1O60741 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.05■□□□□ -0
HCN1O60741 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HCN1O60741 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HCN1O60741 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.05■□□□□ -0
HCN1O60741 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
HCN1O60741 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.05■□□□□ -0
HCN1O60741 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
HCN1O60741 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.05■□□□□ -0
HCN1O60741 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.05■□□□□ -0
HCN1O60741 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.05■□□□□ -0
HCN1O60741 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
HCN1O60741 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.05■□□□□ -0
HCN1O60741 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HCN1O60741 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HCN1O60741 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.04■□□□□ -0
HCN1O60741 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HCN1O60741 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HCN1O60741 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.04■□□□□ -0
HCN1O60741 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.04■□□□□ -0
HCN1O60741 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HCN1O60741 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
HCN1O60741 UXT-AS1-201ENST00000590504 1525 ntBASIC15.04■□□□□ -0
HCN1O60741 AL161772.1-201ENST00000610494 4412 ntBASIC15.04■□□□□ -0
HCN1O60741 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
HCN1O60741 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.04■□□□□ -0
HCN1O60741 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.04■□□□□ -0
HCN1O60741 CNN2P2-201ENST00000443536 909 ntBASIC15.04■□□□□ -0
HCN1O60741 CNN2P3-201ENST00000450201 906 ntBASIC15.04■□□□□ -0
HCN1O60741 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.04■□□□□ -0
HCN1O60741 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.04■□□□□ -0
HCN1O60741 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms