Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.92□□□□□ -0.02
PRKNO60260 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.92□□□□□ -0.02
PRKNO60260 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.92□□□□□ -0.02
PRKNO60260 AL844908.2-201ENST00000609461 460 ntBASIC14.92□□□□□ -0.02
PRKNO60260 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.92□□□□□ -0.02
PRKNO60260 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.92□□□□□ -0.02
PRKNO60260 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
PRKNO60260 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRKNO60260 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PRKNO60260 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRKNO60260 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKNO60260 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRKNO60260 AL603832.2-201ENST00000566195 2125 ntBASIC14.92□□□□□ -0.02
PRKNO60260 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
PRKNO60260 AL691432.1-201ENST00000596308 1422 ntBASIC14.92□□□□□ -0.02
PRKNO60260 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.92□□□□□ -0.02
PRKNO60260 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.91□□□□□ -0.02
PRKNO60260 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PRKNO60260 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PRKNO60260 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PRKNO60260 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKNO60260 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.91□□□□□ -0.02
PRKNO60260 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKNO60260 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.91□□□□□ -0.02
PRKNO60260 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.91□□□□□ -0.02
PRKNO60260 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKNO60260 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.91□□□□□ -0.02
PRKNO60260 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKNO60260 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.91□□□□□ -0.02
PRKNO60260 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PRKNO60260 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKNO60260 BNIP3P1-202ENST00000550043 1585 ntBASIC14.91□□□□□ -0.02
PRKNO60260 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKNO60260 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PRKNO60260 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.91□□□□□ -0.02
PRKNO60260 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKNO60260 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKNO60260 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKNO60260 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKNO60260 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRKNO60260 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.91□□□□□ -0.02
PRKNO60260 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKNO60260 SPDYE17-201ENST00000412399 783 ntBASIC14.91□□□□□ -0.02
PRKNO60260 FAM8A3P-201ENST00000427218 844 ntBASIC14.91□□□□□ -0.02
PRKNO60260 AC245100.5-201ENST00000452108 331 ntBASIC14.91□□□□□ -0.02
PRKNO60260 AL512638.1-201ENST00000457493 794 ntBASIC14.91□□□□□ -0.02
PRKNO60260 AL512361.1-201ENST00000554200 418 ntBASIC14.91□□□□□ -0.02
PRKNO60260 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.91□□□□□ -0.02
PRKNO60260 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.91□□□□□ -0.02
PRKNO60260 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.91□□□□□ -0.02
PRKNO60260 AJ011932.1-201ENST00000621707 465 ntBASIC14.91□□□□□ -0.02
PRKNO60260 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PRKNO60260 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
PRKNO60260 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRKNO60260 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRKNO60260 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PRKNO60260 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRKNO60260 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKNO60260 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKNO60260 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PRKNO60260 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.91□□□□□ -0.02
PRKNO60260 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
PRKNO60260 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.91□□□□□ -0.02
PRKNO60260 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRKNO60260 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRKNO60260 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKNO60260 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
PRKNO60260 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.91□□□□□ -0.02
PRKNO60260 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.91□□□□□ -0.02
PRKNO60260 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRKNO60260 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PRKNO60260 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKNO60260 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKNO60260 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKNO60260 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PRKNO60260 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.9□□□□□ -0.02
PRKNO60260 KRT8P12-202ENST00000472924 1397 ntBASIC14.9□□□□□ -0.02
PRKNO60260 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.9□□□□□ -0.02
PRKNO60260 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKNO60260 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.9□□□□□ -0.02
PRKNO60260 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.9□□□□□ -0.02
PRKNO60260 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKNO60260 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PRKNO60260 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKNO60260 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.9□□□□□ -0.02
PRKNO60260 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.9□□□□□ -0.02
PRKNO60260 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.9□□□□□ -0.02
PRKNO60260 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.9□□□□□ -0.02
PRKNO60260 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.9□□□□□ -0.02
PRKNO60260 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.9□□□□□ -0.02
PRKNO60260 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.9□□□□□ -0.02
PRKNO60260 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.9□□□□□ -0.02
PRKNO60260 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.9□□□□□ -0.02
PRKNO60260 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PRKNO60260 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PRKNO60260 LINC02447-202ENST00000501888 2146 ntBASIC14.9□□□□□ -0.02
PRKNO60260 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKNO60260 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKNO60260 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRKNO60260 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms