Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.3■□□□□ 0.2
RIPK2O43353 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.3■□□□□ 0.2
RIPK2O43353 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.3■□□□□ 0.2
RIPK2O43353 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.3■□□□□ 0.2
RIPK2O43353 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RIPK2O43353 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.3■□□□□ 0.2
RIPK2O43353 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
RIPK2O43353 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.3■□□□□ 0.2
RIPK2O43353 AC018892.3-201ENST00000623986 2499 ntBASIC16.3■□□□□ 0.2
RIPK2O43353 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIPK2O43353 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIPK2O43353 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIPK2O43353 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
RIPK2O43353 AC073439.1-201ENST00000624121 1774 ntBASIC16.3■□□□□ 0.2
RIPK2O43353 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RIPK2O43353 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
RIPK2O43353 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.3■□□□□ 0.2
RIPK2O43353 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIPK2O43353 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIPK2O43353 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIPK2O43353 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIPK2O43353 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
RIPK2O43353 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RIPK2O43353 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIPK2O43353 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
RIPK2O43353 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RIPK2O43353 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RIPK2O43353 AL359258.3-201ENST00000622910 2331 ntBASIC16.29■□□□□ 0.2
RIPK2O43353 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.29■□□□□ 0.2
RIPK2O43353 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.29■□□□□ 0.2
RIPK2O43353 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RIPK2O43353 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RIPK2O43353 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RIPK2O43353 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RIPK2O43353 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RIPK2O43353 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RIPK2O43353 KRT18P34-201ENST00000488218 1270 ntBASIC16.29■□□□□ 0.2
RIPK2O43353 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.29■□□□□ 0.2
RIPK2O43353 AC091304.2-201ENST00000564639 760 ntBASIC16.29■□□□□ 0.2
RIPK2O43353 AC002347.1-201ENST00000569543 541 ntBASIC16.29■□□□□ 0.2
RIPK2O43353 MIR3652-201ENST00000579335 131 ntBASIC16.29■□□□□ 0.2
RIPK2O43353 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RIPK2O43353 AC008735.5-201ENST00000623544 497 ntBASIC16.29■□□□□ 0.2
RIPK2O43353 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RIPK2O43353 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RIPK2O43353 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RIPK2O43353 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RIPK2O43353 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RIPK2O43353 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RIPK2O43353 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RIPK2O43353 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.29■□□□□ 0.2
RIPK2O43353 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RIPK2O43353 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.28■□□□□ 0.2
RIPK2O43353 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RIPK2O43353 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RIPK2O43353 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RIPK2O43353 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RIPK2O43353 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RIPK2O43353 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RIPK2O43353 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RIPK2O43353 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RIPK2O43353 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.28■□□□□ 0.2
RIPK2O43353 AL513480.1-201ENST00000451731 511 ntBASIC16.28■□□□□ 0.2
RIPK2O43353 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.28■□□□□ 0.2
RIPK2O43353 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.28■□□□□ 0.2
RIPK2O43353 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.28■□□□□ 0.2
RIPK2O43353 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.28■□□□□ 0.2
RIPK2O43353 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.28■□□□□ 0.2
RIPK2O43353 AC109635.5-201ENST00000533593 962 ntBASIC16.28■□□□□ 0.2
RIPK2O43353 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.28■□□□□ 0.2
RIPK2O43353 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.28■□□□□ 0.2
RIPK2O43353 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
RIPK2O43353 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RIPK2O43353 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RIPK2O43353 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RIPK2O43353 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RIPK2O43353 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RIPK2O43353 FGD5P1-202ENST00000614866 2498 ntBASIC16.28■□□□□ 0.2
RIPK2O43353 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RIPK2O43353 AC127383.1-201ENST00000444697 1800 ntBASIC16.28■□□□□ 0.2
RIPK2O43353 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RIPK2O43353 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RIPK2O43353 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RIPK2O43353 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.28■□□□□ 0.2
RIPK2O43353 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RIPK2O43353 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RIPK2O43353 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RIPK2O43353 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
RIPK2O43353 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RIPK2O43353 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RIPK2O43353 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RIPK2O43353 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.27■□□□□ 0.2
RIPK2O43353 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RIPK2O43353 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.27■□□□□ 0.2
RIPK2O43353 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RIPK2O43353 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.27■□□□□ 0.2
RIPK2O43353 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RIPK2O43353 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RIPK2O43353 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RIPK2O43353 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms