Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
NDUFA1O15239 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
NDUFA1O15239 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NDUFA1O15239 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NDUFA1O15239 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
NDUFA1O15239 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NDUFA1O15239 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NDUFA1O15239 KCP-203ENST00000610776 5108 ntTSL 5 BASIC11.02□□□□□ -0.65
NDUFA1O15239 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
NDUFA1O15239 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC11.02□□□□□ -0.65
NDUFA1O15239 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC11.02□□□□□ -0.65
NDUFA1O15239 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NDUFA1O15239 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
NDUFA1O15239 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC11.02□□□□□ -0.65
NDUFA1O15239 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NDUFA1O15239 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC11.02□□□□□ -0.65
NDUFA1O15239 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC11.02□□□□□ -0.65
NDUFA1O15239 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC11.02□□□□□ -0.65
NDUFA1O15239 HCG4P8-203ENST00000443049 980 ntBASIC11.02□□□□□ -0.65
NDUFA1O15239 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC11.02□□□□□ -0.65
NDUFA1O15239 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC11.02□□□□□ -0.65
NDUFA1O15239 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.02□□□□□ -0.65
NDUFA1O15239 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC11.02□□□□□ -0.65
NDUFA1O15239 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC11.02□□□□□ -0.65
NDUFA1O15239 PRELID1P1-202ENST00000567272 903 ntBASIC11.02□□□□□ -0.65
NDUFA1O15239 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NDUFA1O15239 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC11.02□□□□□ -0.65
NDUFA1O15239 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC11.02□□□□□ -0.65
NDUFA1O15239 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
NDUFA1O15239 AC004706.3-202ENST00000621574 984 ntBASIC11.02□□□□□ -0.65
NDUFA1O15239 HADH-212ENST00000638621 741 ntTSL 5 BASIC11.02□□□□□ -0.65
NDUFA1O15239 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC11.02□□□□□ -0.65
NDUFA1O15239 AL805961.1-202ENST00000641562 540 ntBASIC11.02□□□□□ -0.65
NDUFA1O15239 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NDUFA1O15239 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NDUFA1O15239 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NDUFA1O15239 AC008677.1-201ENST00000519230 1561 ntBASIC11.02□□□□□ -0.65
NDUFA1O15239 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC11.02□□□□□ -0.65
NDUFA1O15239 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
NDUFA1O15239 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NDUFA1O15239 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC11.02□□□□□ -0.65
NDUFA1O15239 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NDUFA1O15239 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
NDUFA1O15239 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NDUFA1O15239 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NDUFA1O15239 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NDUFA1O15239 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC11.02□□□□□ -0.65
NDUFA1O15239 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC11.02□□□□□ -0.65
NDUFA1O15239 AP003680.1-201ENST00000598970 3660 ntBASIC11.02□□□□□ -0.65
NDUFA1O15239 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
NDUFA1O15239 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC11.01□□□□□ -0.65
NDUFA1O15239 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NDUFA1O15239 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NDUFA1O15239 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
NDUFA1O15239 CICP23-201ENST00000605013 2741 ntBASIC11.01□□□□□ -0.65
NDUFA1O15239 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NDUFA1O15239 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
NDUFA1O15239 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NDUFA1O15239 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NDUFA1O15239 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC11.01□□□□□ -0.65
NDUFA1O15239 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
NDUFA1O15239 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NDUFA1O15239 AL353732.1-201ENST00000569618 1459 ntBASIC11.01□□□□□ -0.65
NDUFA1O15239 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
NDUFA1O15239 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC11.01□□□□□ -0.65
NDUFA1O15239 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC11.01□□□□□ -0.65
NDUFA1O15239 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
NDUFA1O15239 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NDUFA1O15239 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
NDUFA1O15239 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC11.01□□□□□ -0.65
NDUFA1O15239 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC11.01□□□□□ -0.65
NDUFA1O15239 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NDUFA1O15239 HIST2H3DP1-201ENST00000401004 416 ntBASIC11.01□□□□□ -0.65
NDUFA1O15239 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC11.01□□□□□ -0.65
NDUFA1O15239 LAGE3P1-201ENST00000425356 484 ntBASIC11.01□□□□□ -0.65
NDUFA1O15239 UPK3BP1-201ENST00000428678 509 ntBASIC11.01□□□□□ -0.65
NDUFA1O15239 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NDUFA1O15239 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC11.01□□□□□ -0.65
NDUFA1O15239 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NDUFA1O15239 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC11.01□□□□□ -0.65
NDUFA1O15239 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC11.01□□□□□ -0.65
NDUFA1O15239 KRT18P31-201ENST00000506277 1292 ntBASIC11.01□□□□□ -0.65
NDUFA1O15239 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NDUFA1O15239 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
NDUFA1O15239 AC091304.2-201ENST00000564639 760 ntBASIC11.01□□□□□ -0.65
NDUFA1O15239 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC11.01□□□□□ -0.65
NDUFA1O15239 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC11.01□□□□□ -0.65
NDUFA1O15239 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
NDUFA1O15239 GGTLC5P-201ENST00000617623 998 ntBASIC11.01□□□□□ -0.65
NDUFA1O15239 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NDUFA1O15239 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC11.01□□□□□ -0.65
NDUFA1O15239 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC11.01□□□□□ -0.65
NDUFA1O15239 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
NDUFA1O15239 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NDUFA1O15239 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NDUFA1O15239 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
NDUFA1O15239 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC11.01□□□□□ -0.65
NDUFA1O15239 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NDUFA1O15239 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
NDUFA1O15239 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms