Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 AC092850.2-201ENST00000623821 2697 ntBASIC21.02■□□□□ 0.96
APAF1O14727 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
APAF1O14727 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
APAF1O14727 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.02■□□□□ 0.96
APAF1O14727 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
APAF1O14727 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
APAF1O14727 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
APAF1O14727 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
APAF1O14727 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
APAF1O14727 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
APAF1O14727 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
APAF1O14727 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
APAF1O14727 CENPM-206ENST00000407253 818 ntTSL 2 BASIC21.02■□□□□ 0.96
APAF1O14727 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC21.02■□□□□ 0.96
APAF1O14727 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC21.02■□□□□ 0.96
APAF1O14727 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC21.02■□□□□ 0.96
APAF1O14727 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC21.02■□□□□ 0.96
APAF1O14727 AL844908.2-201ENST00000609461 460 ntBASIC21.02■□□□□ 0.96
APAF1O14727 ORC5-208ENST00000626700 344 ntTSL 3 BASIC21.02■□□□□ 0.96
APAF1O14727 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC21.02■□□□□ 0.96
APAF1O14727 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
APAF1O14727 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
APAF1O14727 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
APAF1O14727 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
APAF1O14727 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
APAF1O14727 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC21.02■□□□□ 0.95
APAF1O14727 AC092127.1-201ENST00000567093 3455 ntBASIC21.02■□□□□ 0.95
APAF1O14727 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
APAF1O14727 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
APAF1O14727 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
APAF1O14727 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
APAF1O14727 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
APAF1O14727 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
APAF1O14727 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
APAF1O14727 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
APAF1O14727 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
APAF1O14727 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
APAF1O14727 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
APAF1O14727 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
APAF1O14727 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
APAF1O14727 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
APAF1O14727 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
APAF1O14727 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC21.01■□□□□ 0.95
APAF1O14727 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
APAF1O14727 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC21.01■□□□□ 0.95
APAF1O14727 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC21.01■□□□□ 0.95
APAF1O14727 AC010336.2-201ENST00000564226 506 ntBASIC21.01■□□□□ 0.95
APAF1O14727 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
APAF1O14727 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
APAF1O14727 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
APAF1O14727 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
APAF1O14727 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
APAF1O14727 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
APAF1O14727 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC21.01■□□□□ 0.95
APAF1O14727 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
APAF1O14727 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC21.01■□□□□ 0.95
APAF1O14727 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC21.01■□□□□ 0.95
APAF1O14727 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
APAF1O14727 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
APAF1O14727 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC21.01■□□□□ 0.95
APAF1O14727 HYMAI-201ENST00000635591 3347 ntBASIC21.01■□□□□ 0.95
APAF1O14727 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
APAF1O14727 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
APAF1O14727 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
APAF1O14727 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC21■□□□□ 0.95
APAF1O14727 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC21■□□□□ 0.95
APAF1O14727 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
APAF1O14727 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
APAF1O14727 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
APAF1O14727 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC21■□□□□ 0.95
APAF1O14727 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC21■□□□□ 0.95
APAF1O14727 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC21■□□□□ 0.95
APAF1O14727 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
APAF1O14727 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC21■□□□□ 0.95
APAF1O14727 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC21■□□□□ 0.95
APAF1O14727 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
APAF1O14727 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC21■□□□□ 0.95
APAF1O14727 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC21■□□□□ 0.95
APAF1O14727 AL390754.1-201ENST00000619088 582 ntBASIC21■□□□□ 0.95
APAF1O14727 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC21■□□□□ 0.95
APAF1O14727 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC21■□□□□ 0.95
APAF1O14727 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC21■□□□□ 0.95
APAF1O14727 AL607033.1-201ENST00000623900 1599 ntBASIC21■□□□□ 0.95
APAF1O14727 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
APAF1O14727 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
APAF1O14727 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
APAF1O14727 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
APAF1O14727 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
APAF1O14727 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
APAF1O14727 GRN-214ENST00000589265 1632 ntTSL 5 BASIC21■□□□□ 0.95
APAF1O14727 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC21■□□□□ 0.95
APAF1O14727 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC21■□□□□ 0.95
APAF1O14727 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
APAF1O14727 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC20.99■□□□□ 0.95
APAF1O14727 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC20.99■□□□□ 0.95
APAF1O14727 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC20.99■□□□□ 0.95
APAF1O14727 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
APAF1O14727 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC20.99■□□□□ 0.95
APAF1O14727 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
APAF1O14727 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms