Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18■□□□□ 0.47
DDX39AO00148 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
DDX39AO00148 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18■□□□□ 0.47
DDX39AO00148 AC018892.3-201ENST00000623986 2499 ntBASIC18■□□□□ 0.47
DDX39AO00148 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18■□□□□ 0.47
DDX39AO00148 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX39AO00148 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX39AO00148 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX39AO00148 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
DDX39AO00148 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18■□□□□ 0.47
DDX39AO00148 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18■□□□□ 0.47
DDX39AO00148 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18■□□□□ 0.47
DDX39AO00148 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.99■□□□□ 0.47
DDX39AO00148 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX39AO00148 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
DDX39AO00148 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.99■□□□□ 0.47
DDX39AO00148 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DDX39AO00148 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX39AO00148 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.99■□□□□ 0.47
DDX39AO00148 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
DDX39AO00148 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX39AO00148 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DDX39AO00148 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX39AO00148 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX39AO00148 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX39AO00148 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX39AO00148 SPDYE19P-201ENST00000338590 713 ntBASIC17.99■□□□□ 0.47
DDX39AO00148 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
DDX39AO00148 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.99■□□□□ 0.47
DDX39AO00148 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.99■□□□□ 0.47
DDX39AO00148 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.99■□□□□ 0.47
DDX39AO00148 SDHAP3-202ENST00000515467 728 ntBASIC17.99■□□□□ 0.47
DDX39AO00148 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.99■□□□□ 0.47
DDX39AO00148 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.99■□□□□ 0.47
DDX39AO00148 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DDX39AO00148 ZNF890P-202ENST00000530367 1156 ntBASIC17.99■□□□□ 0.47
DDX39AO00148 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX39AO00148 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
DDX39AO00148 AC190387.1-201ENST00000551683 408 ntBASIC17.99■□□□□ 0.47
DDX39AO00148 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.99■□□□□ 0.47
DDX39AO00148 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DDX39AO00148 AC025048.3-201ENST00000590609 569 ntBASIC17.99■□□□□ 0.47
DDX39AO00148 AC005702.4-201ENST00000618393 416 ntBASIC17.99■□□□□ 0.47
DDX39AO00148 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX39AO00148 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX39AO00148 AP001282.1-201ENST00000531301 1499 ntBASIC17.99■□□□□ 0.47
DDX39AO00148 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DDX39AO00148 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DDX39AO00148 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
DDX39AO00148 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DDX39AO00148 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
DDX39AO00148 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX39AO00148 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DDX39AO00148 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
DDX39AO00148 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DDX39AO00148 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DDX39AO00148 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX39AO00148 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX39AO00148 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.98■□□□□ 0.47
DDX39AO00148 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
DDX39AO00148 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX39AO00148 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
DDX39AO00148 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX39AO00148 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DDX39AO00148 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.98■□□□□ 0.47
DDX39AO00148 FO393414.2-201ENST00000405153 598 ntBASIC17.98■□□□□ 0.47
DDX39AO00148 AC015922.1-201ENST00000421102 1152 ntBASIC17.98■□□□□ 0.47
DDX39AO00148 DOC2GP-202ENST00000514950 1163 ntBASIC17.98■□□□□ 0.47
DDX39AO00148 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.98■□□□□ 0.47
DDX39AO00148 AL132655.2-201ENST00000596276 594 ntBASIC17.98■□□□□ 0.47
DDX39AO00148 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
DDX39AO00148 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.98■□□□□ 0.47
DDX39AO00148 BTBD7P1-201ENST00000447253 1453 ntBASIC17.98■□□□□ 0.47
DDX39AO00148 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.98■□□□□ 0.47
DDX39AO00148 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX39AO00148 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX39AO00148 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX39AO00148 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DDX39AO00148 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DDX39AO00148 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DDX39AO00148 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DDX39AO00148 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX39AO00148 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
DDX39AO00148 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DDX39AO00148 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.97■□□□□ 0.47
DDX39AO00148 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
DDX39AO00148 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX39AO00148 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.97■□□□□ 0.47
DDX39AO00148 REXO1L1P-202ENST00000608646 1974 ntBASIC17.97■□□□□ 0.47
DDX39AO00148 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX39AO00148 MTHFR-217ENST00000641820 1569 ntBASIC17.97■□□□□ 0.47
DDX39AO00148 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX39AO00148 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.97■□□□□ 0.47
DDX39AO00148 AC007541.1-201ENST00000570282 1469 ntBASIC17.97■□□□□ 0.47
DDX39AO00148 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DDX39AO00148 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
DDX39AO00148 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX39AO00148 MIR648-201ENST00000385046 94 ntBASIC17.97■□□□□ 0.47
DDX39AO00148 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.97■□□□□ 0.47
DDX39AO00148 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms