Protein–RNA interactions for Protein: A4D1U4

LCHN, Protein LCHN, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCHNA4D1U4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LCHNA4D1U4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LCHNA4D1U4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LCHNA4D1U4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LCHNA4D1U4 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.04■□□□□ 0.32
LCHNA4D1U4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LCHNA4D1U4 GGT3P-204ENST00000453783 1664 ntBASIC17.04■□□□□ 0.32
LCHNA4D1U4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LCHNA4D1U4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LCHNA4D1U4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LCHNA4D1U4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LCHNA4D1U4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LCHNA4D1U4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LCHNA4D1U4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
LCHNA4D1U4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.04■□□□□ 0.32
LCHNA4D1U4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LCHNA4D1U4 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LCHNA4D1U4 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.04■□□□□ 0.32
LCHNA4D1U4 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LCHNA4D1U4 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.04■□□□□ 0.32
LCHNA4D1U4 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
LCHNA4D1U4 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LCHNA4D1U4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.04■□□□□ 0.32
LCHNA4D1U4 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LCHNA4D1U4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LCHNA4D1U4 RPL13AP25-201ENST00000484130 612 ntBASIC17.04■□□□□ 0.32
LCHNA4D1U4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
LCHNA4D1U4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LCHNA4D1U4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.04■□□□□ 0.32
LCHNA4D1U4 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.04■□□□□ 0.32
LCHNA4D1U4 AP001063.1-201ENST00000568332 529 ntBASIC17.04■□□□□ 0.32
LCHNA4D1U4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LCHNA4D1U4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.04■□□□□ 0.32
LCHNA4D1U4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.04■□□□□ 0.32
LCHNA4D1U4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.04■□□□□ 0.32
LCHNA4D1U4 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LCHNA4D1U4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.04■□□□□ 0.32
LCHNA4D1U4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LCHNA4D1U4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.04■□□□□ 0.32
LCHNA4D1U4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LCHNA4D1U4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.04■□□□□ 0.32
LCHNA4D1U4 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
LCHNA4D1U4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LCHNA4D1U4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LCHNA4D1U4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LCHNA4D1U4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LCHNA4D1U4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.03■□□□□ 0.32
LCHNA4D1U4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCHNA4D1U4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.03■□□□□ 0.32
LCHNA4D1U4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
LCHNA4D1U4 AC106886.4-201ENST00000623557 2502 ntBASIC17.03■□□□□ 0.32
LCHNA4D1U4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LCHNA4D1U4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
LCHNA4D1U4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
LCHNA4D1U4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LCHNA4D1U4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LCHNA4D1U4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCHNA4D1U4 SLC25A24P2-201ENST00000415059 510 ntBASIC17.03■□□□□ 0.32
LCHNA4D1U4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.03■□□□□ 0.32
LCHNA4D1U4 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.03■□□□□ 0.32
LCHNA4D1U4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LCHNA4D1U4 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.03■□□□□ 0.32
LCHNA4D1U4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.03■□□□□ 0.32
LCHNA4D1U4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.03■□□□□ 0.32
LCHNA4D1U4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.03■□□□□ 0.32
LCHNA4D1U4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.03■□□□□ 0.32
LCHNA4D1U4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.03■□□□□ 0.32
LCHNA4D1U4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCHNA4D1U4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LCHNA4D1U4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCHNA4D1U4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.03■□□□□ 0.32
LCHNA4D1U4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCHNA4D1U4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LCHNA4D1U4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCHNA4D1U4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCHNA4D1U4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.03■□□□□ 0.32
LCHNA4D1U4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LCHNA4D1U4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LCHNA4D1U4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LCHNA4D1U4 BNIP3P1-202ENST00000550043 1585 ntBASIC17.02■□□□□ 0.32
LCHNA4D1U4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LCHNA4D1U4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LCHNA4D1U4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LCHNA4D1U4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LCHNA4D1U4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LCHNA4D1U4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LCHNA4D1U4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LCHNA4D1U4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.02■□□□□ 0.32
LCHNA4D1U4 REXO1L8P-201ENST00000604378 1897 ntBASIC17.02■□□□□ 0.32
LCHNA4D1U4 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LCHNA4D1U4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LCHNA4D1U4 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LCHNA4D1U4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LCHNA4D1U4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
LCHNA4D1U4 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LCHNA4D1U4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
LCHNA4D1U4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LCHNA4D1U4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.02■□□□□ 0.32
LCHNA4D1U4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.02■□□□□ 0.32
LCHNA4D1U4 AC243562.2-201ENST00000561247 970 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms