Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 LINC00554-201ENST00000564841 3011 ntBASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC125807.1-201ENST00000483097 614 ntBASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC093214.1-201ENST00000511688 1107 ntBASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AL512356.2-201ENST00000546955 174 ntBASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 DUX4L27-201ENST00000554796 1261 ntBASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 LINC01225-203ENST00000563550 1244 ntBASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC026150.2-201ENST00000564693 1156 ntBASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC092384.3-202ENST00000564646 2873 ntBASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 LINC02447-202ENST00000501888 2146 ntBASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CDC14C-201ENST00000428251 1719 ntBASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC007326.2-201ENST00000624224 7579 ntBASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MIR648-201ENST00000385046 94 ntBASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MIR943-201ENST00000401286 94 ntBASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC107890.1-201ENST00000422478 521 ntBASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 KLF2P3-201ENST00000451977 1087 ntBASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AP000842.3-202ENST00000569238 1080 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms