Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 HMGA1P7-201ENST00000406908 502 ntBASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 AC093827.2-201ENST00000512654 315 ntBASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV3S1A0A5B6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 AC018892.3-201ENST00000623986 2499 ntBASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 AC006557.2-201ENST00000592985 1240 ntBASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 AL355877.3-201ENST00000622820 899 ntBASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV3S1A0A5B6 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 AL589702.1-201ENST00000641229 1509 ntBASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms