Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 AL161772.1-201ENST00000610494 4412 ntBASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 AC007686.3-201ENST00000619017 3487 ntBASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 AC006504.4-201ENST00000592118 1568 ntBASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 AC148477.4-201ENST00000613430 1793 ntBASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 KRT16P4-201ENST00000453883 522 ntBASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 DUX4L26-201ENST00000489078 1255 ntBASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 AP000867.3-201ENST00000524675 377 ntBASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 MIR3909-201ENST00000579518 119 ntBASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRDV1A0A1B0GX56 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms