Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
HLA-DRB4X5D2U9 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 AL596087.1-201ENST00000400979 1969 ntBASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 TFAMP1-201ENST00000412727 736 ntBASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.14□□□□□ -0.47
HLA-DRB4X5D2U9 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 ADH5P3-201ENST00000433842 1137 ntBASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 AC105233.2-201ENST00000523697 349 ntBASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 AF228730.5-201ENST00000530288 346 ntBASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 AL365330.1-201ENST00000607459 531 ntBASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms