Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.35■□□□□ 0.69
DDX49Q9Y6V7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.35■□□□□ 0.69
DDX49Q9Y6V7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX49Q9Y6V7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX49Q9Y6V7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
DDX49Q9Y6V7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.35■□□□□ 0.69
DDX49Q9Y6V7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX49Q9Y6V7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX49Q9Y6V7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 AC068587.6-202ENST00000641839 5619 ntBASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 KRT8P49-201ENST00000604166 1432 ntBASIC19.34■□□□□ 0.69
DDX49Q9Y6V7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
DDX49Q9Y6V7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
DDX49Q9Y6V7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DDX49Q9Y6V7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
DDX49Q9Y6V7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC19.33■□□□□ 0.69
DDX49Q9Y6V7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
DDX49Q9Y6V7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
DDX49Q9Y6V7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
DDX49Q9Y6V7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
DDX49Q9Y6V7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
DDX49Q9Y6V7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DDX49Q9Y6V7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
DDX49Q9Y6V7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DDX49Q9Y6V7 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DDX49Q9Y6V7 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
DDX49Q9Y6V7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
DDX49Q9Y6V7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
DDX49Q9Y6V7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
DDX49Q9Y6V7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
DDX49Q9Y6V7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDX49Q9Y6V7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDX49Q9Y6V7 AL355306.1-201ENST00000415580 579 ntBASIC19.33■□□□□ 0.68
DDX49Q9Y6V7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.33■□□□□ 0.68
DDX49Q9Y6V7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.33■□□□□ 0.68
DDX49Q9Y6V7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.33■□□□□ 0.68
DDX49Q9Y6V7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDX49Q9Y6V7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDX49Q9Y6V7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDX49Q9Y6V7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDX49Q9Y6V7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
DDX49Q9Y6V7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDX49Q9Y6V7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
DDX49Q9Y6V7 AC006058.4-201ENST00000624016 1670 ntBASIC19.33■□□□□ 0.68
DDX49Q9Y6V7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
DDX49Q9Y6V7 PPT1-215ENST00000641471 2368 ntBASIC19.33■□□□□ 0.68
DDX49Q9Y6V7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 AC129492.6-201ENST00000611383 1305 ntBASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 AC004449.1-201ENST00000564240 433 ntBASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
DDX49Q9Y6V7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms