Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 AC087163.2-201ENST00000457299 853 ntBASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 KRT18P31-201ENST00000506277 1292 ntBASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 AP002469.2-201ENST00000531724 424 ntBASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 AC087641.1-201ENST00000557561 1021 ntBASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 AL591684.3-201ENST00000605187 298 ntBASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 AC120114.3-201ENST00000611923 658 ntBASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 AGAP7P-201ENST00000582299 2062 ntBASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 AGAP14-201ENST00000624701 2060 ntBASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 AC091951.1-201ENST00000512854 2465 ntBASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 MROH4P-201ENST00000431302 1578 ntBASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDHGB1Q9Y5G3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 BX005266.1-201ENST00000473402 457 ntBASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 AL662844.1-201ENST00000546340 181 ntBASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 SLC25A6P4-201ENST00000586535 553 ntBASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 AL139288.1-201ENST00000623748 933 ntBASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGB1Q9Y5G3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms