Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 AL391825.1-201ENST00000457671 1364 ntBASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 AL589987.1-201ENST00000453380 819 ntBASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 RN7SL692P-201ENST00000464677 288 ntBASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 ARL16-202ENST00000570561 768 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC00588Q9Y4M8 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC00588Q9Y4M8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC00588Q9Y4M8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
LINC00588Q9Y4M8 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC00588Q9Y4M8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC00588Q9Y4M8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
LINC00588Q9Y4M8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC00588Q9Y4M8 AC124067.4-201ENST00000519691 2379 ntBASIC10.96□□□□□ -0.66
LINC00588Q9Y4M8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC00588Q9Y4M8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC10.96□□□□□ -0.66
LINC00588Q9Y4M8 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC10.96□□□□□ -0.66
LINC00588Q9Y4M8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC00588Q9Y4M8 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC00588Q9Y4M8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC00588Q9Y4M8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 FTH1-202ENST00000526640 786 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 AC055876.2-201ENST00000531834 546 ntBASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 AC092337.1-201ENST00000568699 1129 ntBASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LINC00588Q9Y4M8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms