Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 AC144831.1-201ENST00000573312 2656 ntBASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 MIR940-201ENST00000401276 94 ntBASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 POLD2P1-201ENST00000511220 997 ntBASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 AC016027.1-202ENST00000607927 1699 ntBASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LIN7CQ9NUP9 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
LIN7CQ9NUP9 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
LIN7CQ9NUP9 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 AL031432.2-201ENST00000566714 459 ntBASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 AL928711.1-201ENST00000570165 459 ntBASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 MIR4515-201ENST00000584082 81 ntBASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 AC006058.4-201ENST00000624016 1670 ntBASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 BCAR1-209ENST00000546196 1340 ntBASIC13.39□□□□□ -0.27
LIN7CQ9NUP9 SBF1P1-201ENST00000444527 5631 ntBASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms