Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 AC020658.6-201ENST00000623564 1870 ntBASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 AC140878.1-201ENST00000565277 250 ntBASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 TEX28P1-201ENST00000613479 1221 ntBASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 TEX28P2-201ENST00000617764 1221 ntBASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 FO538757.1-201ENST00000623083 1397 ntBASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BLOC1S4Q9NUP1 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
BLOC1S4Q9NUP1 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
BLOC1S4Q9NUP1 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms