Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GCM1Q9NP62 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GCM1Q9NP62 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GCM1Q9NP62 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GCM1Q9NP62 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
GCM1Q9NP62 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GCM1Q9NP62 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
GCM1Q9NP62 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
GCM1Q9NP62 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
GCM1Q9NP62 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.75□□□□□ -0.21
GCM1Q9NP62 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
GCM1Q9NP62 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.75□□□□□ -0.21
GCM1Q9NP62 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
GCM1Q9NP62 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 AL645939.2-201ENST00000427340 991 ntBASIC13.75□□□□□ -0.21
GCM1Q9NP62 CNN2P2-201ENST00000443536 909 ntBASIC13.75□□□□□ -0.21
GCM1Q9NP62 CNN2P3-201ENST00000450201 906 ntBASIC13.75□□□□□ -0.21
GCM1Q9NP62 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.75□□□□□ -0.21
GCM1Q9NP62 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.75□□□□□ -0.21
GCM1Q9NP62 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.75□□□□□ -0.21
GCM1Q9NP62 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.75□□□□□ -0.21
GCM1Q9NP62 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.75□□□□□ -0.21
GCM1Q9NP62 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.75□□□□□ -0.21
GCM1Q9NP62 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
GCM1Q9NP62 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
GCM1Q9NP62 AL136317.3-201ENST00000618497 906 ntBASIC13.75□□□□□ -0.21
GCM1Q9NP62 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 Z92544.3-201ENST00000624747 417 ntBASIC13.75□□□□□ -0.21
GCM1Q9NP62 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.75□□□□□ -0.21
GCM1Q9NP62 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.75□□□□□ -0.21
GCM1Q9NP62 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.75□□□□□ -0.21
GCM1Q9NP62 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.75□□□□□ -0.21
GCM1Q9NP62 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
GCM1Q9NP62 AC006449.6-201ENST00000612330 2296 ntBASIC13.75□□□□□ -0.21
GCM1Q9NP62 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.75□□□□□ -0.21
GCM1Q9NP62 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
GCM1Q9NP62 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
GCM1Q9NP62 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GCM1Q9NP62 AC008677.1-201ENST00000519230 1561 ntBASIC13.75□□□□□ -0.21
GCM1Q9NP62 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GCM1Q9NP62 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GCM1Q9NP62 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.74□□□□□ -0.21
GCM1Q9NP62 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GCM1Q9NP62 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
GCM1Q9NP62 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
GCM1Q9NP62 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GCM1Q9NP62 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GCM1Q9NP62 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
GCM1Q9NP62 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.74□□□□□ -0.21
GCM1Q9NP62 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.74□□□□□ -0.21
GCM1Q9NP62 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.74□□□□□ -0.21
GCM1Q9NP62 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GCM1Q9NP62 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GCM1Q9NP62 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.74□□□□□ -0.21
GCM1Q9NP62 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GCM1Q9NP62 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GCM1Q9NP62 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GCM1Q9NP62 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.74□□□□□ -0.21
GCM1Q9NP62 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.74□□□□□ -0.21
GCM1Q9NP62 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.74□□□□□ -0.21
GCM1Q9NP62 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.74□□□□□ -0.21
GCM1Q9NP62 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.74□□□□□ -0.21
GCM1Q9NP62 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GCM1Q9NP62 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.74□□□□□ -0.21
GCM1Q9NP62 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.74□□□□□ -0.21
GCM1Q9NP62 AC015911.4-201ENST00000588022 1070 ntBASIC13.74□□□□□ -0.21
GCM1Q9NP62 MIR4321-201ENST00000592276 80 ntBASIC13.74□□□□□ -0.21
GCM1Q9NP62 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GCM1Q9NP62 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms