Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 CAP2P1-201ENST00000557743 1390 ntBASIC14.57□□□□□ -0.08
CHD8Q9HCK8 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 FAM8A4P-201ENST00000435433 1213 ntBASIC14.57□□□□□ -0.08
CHD8Q9HCK8 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 RN7SL67P-201ENST00000492147 296 ntBASIC14.57□□□□□ -0.08
CHD8Q9HCK8 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 AP001582.1-201ENST00000525856 295 ntBASIC14.57□□□□□ -0.08
CHD8Q9HCK8 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.57□□□□□ -0.08
CHD8Q9HCK8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 TMCO5B-205ENST00000530020 894 ntBASIC14.56□□□□□ -0.08
CHD8Q9HCK8 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 AC084262.1-201ENST00000567818 751 ntBASIC14.56□□□□□ -0.08
CHD8Q9HCK8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 AL023803.2-201ENST00000620080 638 ntBASIC14.56□□□□□ -0.08
CHD8Q9HCK8 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 RPL7P35-201ENST00000446943 740 ntBASIC14.56□□□□□ -0.08
CHD8Q9HCK8 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 AC005618.3-201ENST00000624928 458 ntBASIC14.56□□□□□ -0.08
CHD8Q9HCK8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHD8Q9HCK8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 AC093503.3-201ENST00000624917 2352 ntBASIC14.55□□□□□ -0.08
CHD8Q9HCK8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 AC100850.1-201ENST00000506768 649 ntBASIC14.55□□□□□ -0.08
CHD8Q9HCK8 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 MIR6858-201ENST00000620733 67 ntBASIC14.55□□□□□ -0.08
CHD8Q9HCK8 AC073911.3-201ENST00000624401 631 ntBASIC14.55□□□□□ -0.08
CHD8Q9HCK8 KRT8P4-201ENST00000509735 1454 ntBASIC14.55□□□□□ -0.08
CHD8Q9HCK8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 REXO1L1P-202ENST00000608646 1974 ntBASIC14.55□□□□□ -0.08
CHD8Q9HCK8 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms