Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
CDH20Q9HBT6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CDH20Q9HBT6 LINC02199-201ENST00000506655 2702 ntBASIC14.08□□□□□ -0.15
CDH20Q9HBT6 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CDH20Q9HBT6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.08□□□□□ -0.15
CDH20Q9HBT6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CDH20Q9HBT6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 AC026979.3-201ENST00000607315 403 ntBASIC14.08□□□□□ -0.16
CDH20Q9HBT6 AC018529.1-201ENST00000613063 361 ntBASIC14.08□□□□□ -0.16
CDH20Q9HBT6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.08□□□□□ -0.16
CDH20Q9HBT6 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 CYP2T1P-202ENST00000641596 2535 ntBASIC14.08□□□□□ -0.16
CDH20Q9HBT6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.08□□□□□ -0.16
CDH20Q9HBT6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 MIR648-201ENST00000385046 94 ntBASIC14.07□□□□□ -0.16
CDH20Q9HBT6 GPS2P2-201ENST00000430745 888 ntBASIC14.07□□□□□ -0.16
CDH20Q9HBT6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 SPDYE14P-201ENST00000442619 822 ntBASIC14.07□□□□□ -0.16
CDH20Q9HBT6 AC245100.5-201ENST00000452108 331 ntBASIC14.07□□□□□ -0.16
CDH20Q9HBT6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms