Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 FAM21FP-201ENST00000426241 1131 ntBASIC18.67■□□□□ 0.58
EFCC1Q9HA90 CSF2RBP1-201ENST00000447905 391 ntBASIC18.67■□□□□ 0.58
EFCC1Q9HA90 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 AL662844.4-201ENST00000606367 2838 ntBASIC18.67■□□□□ 0.58
EFCC1Q9HA90 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
EFCC1Q9HA90 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 PFN1P12-201ENST00000455938 534 ntBASIC18.66■□□□□ 0.58
EFCC1Q9HA90 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 TIMM17BP1-201ENST00000545713 516 ntBASIC18.66■□□□□ 0.58
EFCC1Q9HA90 AC092337.1-201ENST00000568699 1129 ntBASIC18.66■□□□□ 0.58
EFCC1Q9HA90 MIR3615-201ENST00000581999 87 ntBASIC18.66■□□□□ 0.58
EFCC1Q9HA90 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCC1Q9HA90 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 RPSAP52-203ENST00000622976 1023 ntBASIC18.65■□□□□ 0.58
EFCC1Q9HA90 AL139011.1-202ENST00000642063 584 ntBASIC18.65■□□□□ 0.58
EFCC1Q9HA90 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms