Protein–RNA interactions for Protein: Q9H0E9

BRD8, Bromodomain-containing protein 8, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD8Q9H0E9 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BRD8Q9H0E9 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BRD8Q9H0E9 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BRD8Q9H0E9 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
BRD8Q9H0E9 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
BRD8Q9H0E9 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.5■□□□□ 0.23
BRD8Q9H0E9 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BRD8Q9H0E9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BRD8Q9H0E9 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BRD8Q9H0E9 RARRES2P9-201ENST00000565168 469 ntBASIC16.5■□□□□ 0.23
BRD8Q9H0E9 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
BRD8Q9H0E9 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.5■□□□□ 0.23
BRD8Q9H0E9 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BRD8Q9H0E9 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
BRD8Q9H0E9 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BRD8Q9H0E9 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.5■□□□□ 0.23
BRD8Q9H0E9 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
BRD8Q9H0E9 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
BRD8Q9H0E9 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BRD8Q9H0E9 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.5■□□□□ 0.23
BRD8Q9H0E9 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.5■□□□□ 0.23
BRD8Q9H0E9 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BRD8Q9H0E9 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
BRD8Q9H0E9 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
BRD8Q9H0E9 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BRD8Q9H0E9 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
BRD8Q9H0E9 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.5■□□□□ 0.23
BRD8Q9H0E9 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 AC023824.1-201ENST00000562945 2975 ntBASIC16.49■□□□□ 0.23
BRD8Q9H0E9 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 AC093520.2-201ENST00000561830 333 ntBASIC16.49■□□□□ 0.23
BRD8Q9H0E9 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BRD8Q9H0E9 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 AC004461.1-201ENST00000412461 403 ntBASIC16.48■□□□□ 0.23
BRD8Q9H0E9 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 AC004835.2-201ENST00000603762 682 ntBASIC16.48■□□□□ 0.23
BRD8Q9H0E9 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 AC134684.3-201ENST00000641758 218 ntBASIC16.48■□□□□ 0.23
BRD8Q9H0E9 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.48■□□□□ 0.23
BRD8Q9H0E9 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.48■□□□□ 0.23
BRD8Q9H0E9 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms