Protein–RNA interactions for Protein: Q9BX63

BRIP1, Fanconi anemia group J protein, humanhuman

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1Q9BX63 HNRNPUP1-201ENST00000554987 333 ntBASIC19.64■□□□□ 0.73
BRIP1Q9BX63 IFT20-206ENST00000578122 834 ntTSL 2 BASIC19.64■□□□□ 0.73
BRIP1Q9BX63 IFT20-208ENST00000578985 831 ntTSL 3 BASIC19.64■□□□□ 0.73
BRIP1Q9BX63 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.64■□□□□ 0.73
BRIP1Q9BX63 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.64■□□□□ 0.73
BRIP1Q9BX63 AC093813.1-201ENST00000605066 256 ntBASIC19.64■□□□□ 0.73
BRIP1Q9BX63 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRIP1Q9BX63 ABBA01031663.1-201ENST00000635630 790 ntBASIC19.64■□□□□ 0.73
BRIP1Q9BX63 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC19.64■□□□□ 0.73
BRIP1Q9BX63 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BRIP1Q9BX63 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.64■□□□□ 0.73
BRIP1Q9BX63 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRIP1Q9BX63 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRIP1Q9BX63 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
BRIP1Q9BX63 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
BRIP1Q9BX63 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
BRIP1Q9BX63 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.64■□□□□ 0.73
BRIP1Q9BX63 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.64■□□□□ 0.73
BRIP1Q9BX63 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BRIP1Q9BX63 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
BRIP1Q9BX63 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRIP1Q9BX63 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.64■□□□□ 0.73
BRIP1Q9BX63 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 AL121723.1-201ENST00000445194 1519 ntBASIC19.63■□□□□ 0.73
BRIP1Q9BX63 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 DRD5P1-201ENST00000456605 1438 ntBASIC19.63■□□□□ 0.73
BRIP1Q9BX63 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 KRT18P43-201ENST00000469825 1281 ntBASIC19.63■□□□□ 0.73
BRIP1Q9BX63 PFN2-215ENST00000497148 743 ntTSL 4 BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 RNA5SP423-201ENST00000517127 109 ntBASIC19.63■□□□□ 0.73
BRIP1Q9BX63 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 KSR1-207ENST00000578981 748 ntTSL 4 BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 AL450472.2-201ENST00000603663 1156 ntBASIC19.63■□□□□ 0.73
BRIP1Q9BX63 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRIP1Q9BX63 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 AP001282.1-201ENST00000531301 1499 ntBASIC19.62■□□□□ 0.73
BRIP1Q9BX63 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 AC106872.11-201ENST00000605838 421 ntBASIC19.62■□□□□ 0.73
BRIP1Q9BX63 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRIP1Q9BX63 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRIP1Q9BX63 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRIP1Q9BX63 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRIP1Q9BX63 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRIP1Q9BX63 REXO1L1P-202ENST00000608646 1974 ntBASIC19.61■□□□□ 0.73
BRIP1Q9BX63 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRIP1Q9BX63 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRIP1Q9BX63 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRIP1Q9BX63 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRIP1Q9BX63 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms