Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 ANKRD19P-201ENST00000338192 862 ntBASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 BNIP3P42-201ENST00000454982 569 ntBASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 BNIP3P29-201ENST00000598302 571 ntBASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 AC011447.5-201ENST00000616168 564 ntBASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC46A1Q96NT5 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 AC005622.1-201ENST00000636801 1703 ntBASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 ACTBP11-201ENST00000436287 1126 ntBASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 RN7SL399P-201ENST00000471648 279 ntBASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 MIR4538-201ENST00000581377 78 ntBASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC46A1Q96NT5 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SLC46A1Q96NT5 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SLC46A1Q96NT5 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.27■□□□□ 0.03
SLC46A1Q96NT5 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC46A1Q96NT5 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC46A1Q96NT5 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC46A1Q96NT5 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
SLC46A1Q96NT5 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
SLC46A1Q96NT5 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC46A1Q96NT5 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC46A1Q96NT5 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
SLC46A1Q96NT5 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC46A1Q96NT5 AC084018.2-201ENST00000613093 2607 ntBASIC15.27■□□□□ 0.03
SLC46A1Q96NT5 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.27■□□□□ 0.03
SLC46A1Q96NT5 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
SLC46A1Q96NT5 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC46A1Q96NT5 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
SLC46A1Q96NT5 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.27■□□□□ 0.03
SLC46A1Q96NT5 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.27■□□□□ 0.03
SLC46A1Q96NT5 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC46A1Q96NT5 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms