Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM11Q96F44 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM11Q96F44 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM11Q96F44 AL022342.1-201ENST00000400363 863 ntBASIC16.97■□□□□ 0.31
TRIM11Q96F44 AL139010.1-201ENST00000454878 894 ntBASIC16.97■□□□□ 0.31
TRIM11Q96F44 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
TRIM11Q96F44 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM11Q96F44 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.97■□□□□ 0.31
TRIM11Q96F44 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TRIM11Q96F44 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.97■□□□□ 0.31
TRIM11Q96F44 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
TRIM11Q96F44 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM11Q96F44 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM11Q96F44 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM11Q96F44 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM11Q96F44 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM11Q96F44 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM11Q96F44 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM11Q96F44 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM11Q96F44 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM11Q96F44 BNIP3P1-202ENST00000550043 1585 ntBASIC16.97■□□□□ 0.31
TRIM11Q96F44 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM11Q96F44 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM11Q96F44 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
TRIM11Q96F44 FLJ16779-201ENST00000612722 7638 ntBASIC16.97■□□□□ 0.31
TRIM11Q96F44 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM11Q96F44 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM11Q96F44 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM11Q96F44 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM11Q96F44 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM11Q96F44 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM11Q96F44 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM11Q96F44 TMBIM7P-203ENST00000641617 1718 ntBASIC16.96■□□□□ 0.31
TRIM11Q96F44 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM11Q96F44 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM11Q96F44 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM11Q96F44 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM11Q96F44 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TRIM11Q96F44 MIR574-201ENST00000385209 96 ntBASIC16.96■□□□□ 0.31
TRIM11Q96F44 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM11Q96F44 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRIM11Q96F44 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM11Q96F44 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.96■□□□□ 0.31
TRIM11Q96F44 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM11Q96F44 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM11Q96F44 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.96■□□□□ 0.31
TRIM11Q96F44 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.96■□□□□ 0.31
TRIM11Q96F44 AC084121.4-201ENST00000641598 221 ntBASIC16.96■□□□□ 0.31
TRIM11Q96F44 AF228730.8-201ENST00000642140 221 ntBASIC16.96■□□□□ 0.31
TRIM11Q96F44 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRIM11Q96F44 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM11Q96F44 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM11Q96F44 NORAD-201ENST00000565493 5339 ntBASIC16.96■□□□□ 0.31
TRIM11Q96F44 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM11Q96F44 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM11Q96F44 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM11Q96F44 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
TRIM11Q96F44 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM11Q96F44 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRIM11Q96F44 AL596257.1-201ENST00000641463 2694 ntBASIC16.96■□□□□ 0.31
TRIM11Q96F44 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRIM11Q96F44 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM11Q96F44 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM11Q96F44 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM11Q96F44 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM11Q96F44 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM11Q96F44 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM11Q96F44 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM11Q96F44 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM11Q96F44 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
TRIM11Q96F44 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM11Q96F44 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
TRIM11Q96F44 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM11Q96F44 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.96■□□□□ 0.3
TRIM11Q96F44 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM11Q96F44 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM11Q96F44 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM11Q96F44 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM11Q96F44 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRIM11Q96F44 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM11Q96F44 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM11Q96F44 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM11Q96F44 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM11Q96F44 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM11Q96F44 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM11Q96F44 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRIM11Q96F44 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM11Q96F44 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
TRIM11Q96F44 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM11Q96F44 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM11Q96F44 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM11Q96F44 HTR5BP-201ENST00000430851 1154 ntBASIC16.95■□□□□ 0.3
TRIM11Q96F44 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM11Q96F44 POLD2P1-201ENST00000511220 997 ntBASIC16.95■□□□□ 0.3
TRIM11Q96F44 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM11Q96F44 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM11Q96F44 AC055717.3-201ENST00000622967 595 ntBASIC16.95■□□□□ 0.3
TRIM11Q96F44 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM11Q96F44 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM11Q96F44 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms