Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APH1AQ96BI3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APH1AQ96BI3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APH1AQ96BI3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APH1AQ96BI3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APH1AQ96BI3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APH1AQ96BI3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.23□□□□□ -0.13
APH1AQ96BI3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
APH1AQ96BI3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
APH1AQ96BI3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APH1AQ96BI3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APH1AQ96BI3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
APH1AQ96BI3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
APH1AQ96BI3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APH1AQ96BI3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.22□□□□□ -0.13
APH1AQ96BI3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
APH1AQ96BI3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.22□□□□□ -0.13
APH1AQ96BI3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.22□□□□□ -0.13
APH1AQ96BI3 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.22□□□□□ -0.13
APH1AQ96BI3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
APH1AQ96BI3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APH1AQ96BI3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APH1AQ96BI3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
APH1AQ96BI3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
APH1AQ96BI3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.22□□□□□ -0.13
APH1AQ96BI3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APH1AQ96BI3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APH1AQ96BI3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APH1AQ96BI3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.22□□□□□ -0.13
APH1AQ96BI3 RPL37AP1-201ENST00000412502 279 ntBASIC14.22□□□□□ -0.13
APH1AQ96BI3 AL080243.2-201ENST00000418783 582 ntBASIC14.22□□□□□ -0.13
APH1AQ96BI3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.22□□□□□ -0.13
APH1AQ96BI3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.22□□□□□ -0.13
APH1AQ96BI3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APH1AQ96BI3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.22□□□□□ -0.13
APH1AQ96BI3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.22□□□□□ -0.13
APH1AQ96BI3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APH1AQ96BI3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.22□□□□□ -0.13
APH1AQ96BI3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APH1AQ96BI3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APH1AQ96BI3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APH1AQ96BI3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.22□□□□□ -0.13
APH1AQ96BI3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
APH1AQ96BI3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APH1AQ96BI3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.22□□□□□ -0.13
APH1AQ96BI3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APH1AQ96BI3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
APH1AQ96BI3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APH1AQ96BI3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
APH1AQ96BI3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APH1AQ96BI3 KRT8P12-202ENST00000472924 1397 ntBASIC14.22□□□□□ -0.13
APH1AQ96BI3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.21□□□□□ -0.13
APH1AQ96BI3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APH1AQ96BI3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APH1AQ96BI3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APH1AQ96BI3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.21□□□□□ -0.13
APH1AQ96BI3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APH1AQ96BI3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
APH1AQ96BI3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APH1AQ96BI3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
APH1AQ96BI3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APH1AQ96BI3 SPDYE17-201ENST00000412399 783 ntBASIC14.21□□□□□ -0.13
APH1AQ96BI3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
APH1AQ96BI3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.21□□□□□ -0.13
APH1AQ96BI3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.21□□□□□ -0.13
APH1AQ96BI3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.21□□□□□ -0.13
APH1AQ96BI3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.21□□□□□ -0.13
APH1AQ96BI3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
APH1AQ96BI3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.21□□□□□ -0.13
APH1AQ96BI3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.21□□□□□ -0.13
APH1AQ96BI3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.21□□□□□ -0.13
APH1AQ96BI3 AL390955.2-201ENST00000603032 514 ntBASIC14.21□□□□□ -0.13
APH1AQ96BI3 TEX28P1-201ENST00000613479 1221 ntBASIC14.21□□□□□ -0.13
APH1AQ96BI3 TEX28P2-201ENST00000617764 1221 ntBASIC14.21□□□□□ -0.13
APH1AQ96BI3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.21□□□□□ -0.13
APH1AQ96BI3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
APH1AQ96BI3 MST1L-201ENST00000442552 2185 ntBASIC14.21□□□□□ -0.13
APH1AQ96BI3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.21□□□□□ -0.13
APH1AQ96BI3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APH1AQ96BI3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.21□□□□□ -0.13
APH1AQ96BI3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
APH1AQ96BI3 AC100757.3-201ENST00000622361 1406 ntBASIC14.21□□□□□ -0.13
APH1AQ96BI3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
APH1AQ96BI3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APH1AQ96BI3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
APH1AQ96BI3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
APH1AQ96BI3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.21□□□□□ -0.13
APH1AQ96BI3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APH1AQ96BI3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APH1AQ96BI3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
APH1AQ96BI3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
APH1AQ96BI3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
APH1AQ96BI3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
APH1AQ96BI3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
APH1AQ96BI3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
APH1AQ96BI3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.21□□□□□ -0.14
APH1AQ96BI3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
APH1AQ96BI3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
APH1AQ96BI3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
APH1AQ96BI3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms